myRT

myRT report for GCA_003348115.1_ASM334811v1

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Seq: QEDV01000012.1 Vibrio cholerae strain BD30 BD30_S30_L001_R1_001contig_12_consensus, whole genome shotgun sequence (198415 bp)
Overview 1 RT 1: 60729-68696 bp Neighborhood of RT #1 [60729, 68716] COG0610 DUF45 RVT-UG2 PinE Feature: gene Location: 60729-64100 bp Feature: domain Description: COG0610 Location: 60774-63909 bp Feature: domain Description: COG061 0 Location: 60774-63909 bp Feature: gene Location: 64132-64833 bp Feature: domain Description: DUF45 Location: 64204-64813 bp Feature: domain Description: DUF45 Location: 64204-6481 3 bp Feature: gene Location: 65472-66782 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 65673-66486 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 65673-66486 bp Feature: gene Location: 66942-67913 bp Feature: gene Location: 68117-68716 bp Feature: domain Description: PinE Location: 68135-68696 bp Feature: domain Description: PinE Location: 681 35-68696 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), DUF45 (pfam01863), RVT-UG2, PinE (COG1961)

Seq: QEDV01000079.1 Vibrio cholerae strain BD30 BD30_S30_L001_R1_001contig_79_consensus, whole genome shotgun sequence (1451 bp)
Overview 1 RT 1: 162-555 bp Neighborhood of RT #1 [162, 1448] RVT-UG12 Feature: gene Location: 162-1448 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 201-555 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 2 01-555 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG12