myRT

myRT report for GCA_003348815.1_ASM334881v1

Download annotations/find similar RTs

Seq: QEAX01000010.1 Vibrio cholerae strain OYP7G04 Vc_OYP7G04_Contig_10, whole genome shotgun sequence (351777 bp)
Overview 1 RT 1: 319504-323365 bp Neighborhood of RT #1 [319504, 323365] PRK07578 SLATT_5 RVT-UG17 INT_ICEBs1_C_like Feature: gene Location: 319504-320121 bp Feature: domain Description: PRK07578 Location: 319525-320113 bp Feature: domain Description: PRK07578 Location: 31 9525-3201 1 3 bp Feature: gene Location: 320548-321201 bp Feature: domain Description: SLATT_5 Location: 320557-321145 bp Feature: domain Description: SLATT_5 Location: 320557-321 1 45 bp Feature: gene Location: 321203-322534 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 321431-322034 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 321 431 -322034 bp Feature: gene Location: 322747-323184 bp Feature: domain Description: INT_ICEBs1_C_like Location: 322912-323110 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 32291 2-3231 1 0 bp Feature: gene Location: 323174-323365 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07578 (short chain dehydrogenase; Provisional), SLATT_5 (pfam18160), RVT-UG17, INT_ICEBs1_C_like (cd01189)

Seq: QEAX01000014.1 Vibrio cholerae strain OYP7G04 Vc_OYP7G04_Contig_14, whole genome shotgun sequence (191620 bp)
Overview 1 RT 1: 132259-139583 bp Neighborhood of RT #1 [132259, 139603] AAA_21 RVT-Retrons HDAC_classIV PRK07726 Feature: gene Location: 132259-132576 bp Feature: gene Location: 132881-135064 bp Feature: domain Description: AAA_21 Location: 132905-133835 bp Feature: domain Description: AAA_2 1 Location: 132 905-133835 bp Feature: gene Location: 135200-136372 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 135365-135989 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 135365-135989 bp Feature: gene Location: 136719-137639 bp Feature: domain Description: HDAC_classIV Location: 136776-137610 bp Feature: domain Description: HDAC_classIV Location: 136776-137610 bp Feature: gene Location: 137660-139603 bp Feature: domain Description: PRK07726 Location: 137669-139583 bp Feature: domain Description: PRK0772 6 Location: 137669-139583 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_21 (pfam13304), RVT-Retrons, HDAC_classIV (cd09993), PRK07726 (DNA topoisomerase 3)