myRT

myRT report for GCA_003349265.1_ASM334926v1

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Seq: QECA01000196.1 Vibrio cholerae strain OYP4F04 Vc_OYP4F04_Contig_196, whole genome shotgun sequence (7521 bp)
Overview 1 RT 1: 3802-7519 bp Neighborhood of RT #1 [3802, 7519] PRK07578 SLATT_5 RVT-UG17 Feature: gene Location: 3802-4419 bp Feature: domain Description: PRK07578 Location: 3823-4411 bp Feature: domain Description: PRK07578 Location: 3823-441 1 bp Feature: gene Location: 4845-5498 bp Feature: domain Description: SLATT_5 Location: 4854-5442 bp Feature: domain Description: SLATT_5 Location: 4854-5442 bp Feature: gene Location: 5500-6831 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 5728-6331 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 5728-6331 bp Feature: gene Location: 7070-7519 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07578 (short chain dehydrogenase; Provisional), SLATT_5 (pfam18160), RVT-UG17

Seq: QECA01000088.1 Vibrio cholerae strain OYP4F04 Vc_OYP4F04_Contig_88, whole genome shotgun sequence (9372 bp)
Overview 1 RT 1: 654-6360 bp Neighborhood of RT #1 [654, 6368] PRK10590 RVT-Retrons Trypsin_2 PRK05096 Feature: gene Location: 654-2048 bp Feature: domain Description: PRK10590 Location: 657-2001 bp Feature: domain Description: PRK10590 Location: 657-2 001 bp Feature: gene Location: 2301-2552 bp Feature: gene Location: 2934-4688 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3144-3747 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3144-3747 bp Feature: domain Description: Trypsin_2 Location: 4140-4572 bp Feature: domain Description: Trypsin_2 Location: 4140-4572 bp Feature: gene Location: 4704-4883 bp Feature: gene Location: 5325-6368 bp Feature: domain Description: PRK05096 Location: 5328-6360 bp Feature: domain Description: PRK05096 Location: 532 8-6360 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10590 (ATP-dependent RNA helicase RhlE; Provisional), RVT-Retrons, Trypsin_2 (pfam13365), PRK05096 (guanosine 5'-monophosphate oxidoreductase; Provisional)