myRT

myRT report for GCA_003349315.1_ASM334931v1

Download annotations/find similar RTs

Seq: QECE01000191.1 Vibrio cholerae strain OYP4D04 Vc_OYP4D04_Contig_191, whole genome shotgun sequence (7097 bp)
Overview 1 RT 1: 3378-7095 bp Neighborhood of RT #1 [3378, 7095] PRK07578 SLATT_5 RVT-UG17 Feature: gene Location: 3378-3995 bp Feature: domain Description: PRK07578 Location: 3399-3987 bp Feature: domain Description: PRK07578 Location: 3399-3987 bp Feature: gene Location: 4421-5074 bp Feature: domain Description: SLATT_5 Location: 4430-5018 bp Feature: domain Description: SLATT_5 Location: 4430-501 8 bp Feature: gene Location: 5076-6407 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 5304-5907 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 5304-5907 bp Feature: gene Location: 6646-7095 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07578 (short chain dehydrogenase; Provisional), SLATT_5 (pfam18160), RVT-UG17

Seq: QECE01000067.1 Vibrio cholerae strain OYP4D04 Vc_OYP4D04_Contig_67, whole genome shotgun sequence (56589 bp)
Overview 1 RT 1: 28049-33755 bp Neighborhood of RT #1 [28049, 33763] PRK10590 RVT-Retrons Trypsin_2 PRK05096 Feature: gene Location: 28049-29443 bp Feature: domain Description: PRK10590 Location: 28052-29396 bp Feature: domain Description: PRK10590 Location: 2 8052 -2 9396 bp Feature: gene Location: 29696-29947 bp Feature: gene Location: 30329-32083 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 30539-31142 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 30539-31142 bp Feature: domain Description: Trypsin_2 Location: 31535-31967 bp Feature: domain Description: Trypsin_2 Location: 31535-31967 bp Feature: gene Location: 32099-32278 bp Feature: gene Location: 32720-33763 bp Feature: domain Description: PRK05096 Location: 32723-33755 bp Feature: domain Description: PRK05096 Location: 32 72 3-33755 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10590 (ATP-dependent RNA helicase RhlE; Provisional), RVT-Retrons, Trypsin_2 (pfam13365), PRK05096 (guanosine 5'-monophosphate oxidoreductase; Provisional)