myRT

myRT report for GCA_003349495.1_ASM334949v1

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Seq: QECQ01000001.1 Vibrio cholerae strain OYP1E12 Vc_OYP1E12_Contig_1, whole genome shotgun sequence (666336 bp)
Overview 1 RT 1: 633906-637767 bp Neighborhood of RT #1 [633906, 637767] PRK07578 SLATT_5 RVT-UG17 INT_ICEBs1_C_like Feature: gene Location: 633906-634523 bp Feature: domain Description: PRK07578 Location: 633927-634515 bp Feature: domain Description: PRK07578 Location: 633927-63451 5 bp Feature: gene Location: 634950-635603 bp Feature: domain Description: SLATT_5 Location: 634959-635547 bp Feature: domain Description: SLATT_5 Location: 634959-635547 bp Feature: gene Location: 635605-636936 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 635833-636436 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 635833-636436 bp Feature: gene Location: 637149-637586 bp Feature: domain Description: INT_ICEBs1_C_like Location: 637314-637512 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 63731 4-63751 2 bp Feature: gene Location: 637576-637767 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07578 (short chain dehydrogenase; Provisional), SLATT_5 (pfam18160), RVT-UG17, INT_ICEBs1_C_like (cd01189)

Seq: QECQ01000006.1 Vibrio cholerae strain OYP1E12 Vc_OYP1E12_Contig_27, whole genome shotgun sequence (191620 bp)
Overview 1 RT 1: 132259-139583 bp Neighborhood of RT #1 [132259, 139603] AAA_21 RVT-Retrons HDAC_classIV PRK07726 Feature: gene Location: 132259-132576 bp Feature: gene Location: 132881-135064 bp Feature: domain Description: AAA_21 Location: 132905-133835 bp Feature: domain Description: AAA_2 1 Location: 132 905-133835 bp Feature: gene Location: 135200-136372 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 135365-135989 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 135365-135989 bp Feature: gene Location: 136719-137639 bp Feature: domain Description: HDAC_classIV Location: 136776-137610 bp Feature: domain Description: HDAC_classIV Location: 136776-137610 bp Feature: gene Location: 137660-139603 bp Feature: domain Description: PRK07726 Location: 137669-139583 bp Feature: domain Description: PRK0772 6 Location: 137669-139583 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_21 (pfam13304), RVT-Retrons, HDAC_classIV (cd09993), PRK07726 (DNA topoisomerase 3)