myRT

myRT report for GCA_003349935.1_ASM334993v1

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Seq: QFXF01000261.1 Endosymbiont of Seepiophila jonesi isolate A1423 Seepiophila_jonesii_RAY_10_12_contig-113000002, whole genome shotgun sequence (4700 bp)
Overview 1 RT 1: 432-3831 bp Neighborhood of RT #1 [432, 4460] PTZ00368 retropepsin_like_LTR_1 RVT-UG26 RNase_HI_RT_Ty3 Integrase_H2C2 rve Feature: gene Location: 432-4460 bp Feature: domain Description: PTZ00368 Location: 978-1233 bp Feature: domain Description: PTZ00368 Location: 978-1 233 bp Feature: domain Description: retropepsin_like_LTR_1 Location: 1389-1638 bp Feature: domain Description: retropepsin_like_LTR_1 Location: 1 389-1 638 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 2256-2373 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 2256-2373 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 2691-3030 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 2691 -3030 bp Feature: domain Description: Integrase_H2C2 Location: 3306-3465 bp Feature: domain Description: Integrase_H2C2 Location: 3306-3465 bp Feature: domain Description: rve Location: 3531-3831 bp Feature: domain Description: rve Location: 3531 -3831 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PTZ00368 (universal minicircle sequence binding protein (UMSBP); Provisional), retropepsin_like_LTR_1 (cd05481), RVT-UG26, RNase_HI_RT_Ty3 (cd09274), Integrase_H2C2 (pfam17921), rve (pfam00665)

Seq: QFXF01000272.1 Endosymbiont of Seepiophila jonesi isolate A1423 Seepiophila_jonesii_RAY_10_12_contig-18000002, whole genome shotgun sequence (3061 bp)
Overview 1 RT 1: 1-2444 bp Neighborhood of RT #1 [1, 2446] HTH_Tnp_1 RVT-GII GIIM RVT-GII GIIM antidote_HigA HigB-like_toxin Feature: gene Location: 1-228 bp Feature: domain Description: HTH_Tnp_1 Location: 10-166 bp Feature: domain Description: HTH_Tnp_1 Location: 10-166 bp Feature: gene Location: 216-896 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 300-588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 300-588 bp Feature: domain Description: GIIM Note: maturase Location: 669-888 bp Feature: domain Description: GIIM Note: maturase Location: 669-888 bp Feature: gene Location: 955-1584 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1051-1213 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1051-12 13 bp Feature: domain Description: GIIM Note: maturase Location: 1288-1507 bp Feature: domain Description: GIIM Note: maturase Location: 12 88-1507 bp Feature: gene Location: 1872-2168 bp Feature: domain Description: antidote_HigA Location: 1887-2121 bp Feature: domain Description: antidote_HigA Location: 1887-2 12 1 bp Feature: gene Location: 2168-2446 bp Feature: domain Description: HigB-like_toxin Location: 2180-2444 bp Feature: domain Description: HigB-like_toxin Location: 2 180-2 444 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_1 (pfam01527), RVT-GII, GIIM (pfam08388), antidote_HigA (TIGR02607), HigB-like_toxin (pfam05015)