myRT

myRT report for GCA_003349955.1_ASM334995v1

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Seq: QLKQ01000164.1 Azospirillum brasilense strain HAMBI_3172 CKLFCLNC_164, whole genome shotgun sequence (1968 bp)
Overview 1 RT 1: 118-1891 bp Neighborhood of RT #1 [118, 1965] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 118-1965 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 367-1198 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 367-1 1 98 bp Feature: domain Description: Intron_maturas2 Location: 1282-1570 bp Feature: domain Description: Intron_maturas2 Location: 1 282-1 570 bp Feature: domain Description: HNHc Note: nucleases Location: 1732-1891 bp Feature: domain Description: HNHc Note: nucleases Location: 1 732-1 891 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: QLKQ01000094.1 Azospirillum brasilense strain HAMBI_3172 CKLFCLNC_94, whole genome shotgun sequence (23407 bp)
Overview 1 RT 1: 3-7501 bp Neighborhood of RT #1 [3, 7512] HTH_13 YfmG RVT-DGRs Hrd YfmG YfmG Feature: gene Location: 3-1085 bp Feature: domain Description: HTH_13 Location: 903-1065 bp Feature: domain Description: HTH_13 Location: 903-1065 bp Feature: gene Location: 1209-2096 bp Feature: domain Description: YfmG Location: 1326-2085 bp Feature: domain Description: YfmG Location: 132 6-2 085 bp Feature: gene Location: 2401-3423 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2608-3199 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 608-3199 bp Feature: gene Location: 3420-3908 bp Feature: domain Description: Hrd Location: 3666-3867 bp Feature: domain Description: Hrd Location: 3666-3867 bp Feature: gene Location: 4039-7512 bp Feature: domain Description: YfmG Location: 5797-6526 bp Feature: domain Description: YfmG Location: 5797-652 6 bp Feature: domain Description: YfmG Location: 6826-7501 bp Feature: domain Description: YfmG Location: 682 6-7501 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfmG (COG1262), RVT-DGRs, HTH_13 (pfam11972)