myRT

myRT report for GCA_003350815.1_ASM335081v1

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Seq: KZ855270.1 Enterococcus faecium strain IHC38 genomic scaffold IHC38_contig_125_consensus, whole genome shotgun sequence (20422 bp)
Overview 1 RT 1: 3379-10969 bp Neighborhood of RT #1 [3379, 10977] Zeta_toxin RVT-GII HNHc group_II_RT_mat HNHc RVT-GII FtsK_SpoIIIE RelB_DinJ Feature: gene Location: 3379-3819 bp Feature: domain Description: Zeta_toxin Location: 3457-3814 bp Feature: domain Description: Zeta_toxin Location: 3457-381 4 bp Feature: gene Location: 3906-4148 bp Feature: gene Location: 4242-6101 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4551-5292 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4551 -5292 bp Feature: domain Description: HNHc Note: nucleases Location: 5847-5985 bp Feature: domain Description: HNHc Note: nucleases Location: 5847-5985 bp Feature: gene Location: 6220-6450 bp Feature: gene Location: 6816-6974 bp Feature: gene Location: 7076-7882 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 7088-7292 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 7088-7292 bp Feature: domain Description: HNHc Note: nucleases Location: 7604-7769 bp Feature: domain Description: HNHc Note: nucleases Location: 7604-7769 bp Feature: gene Location: 7735-8949 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8101-8800 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 01 -8800 bp Feature: gene Location: 9543-10580 bp Feature: domain Description: FtsK_SpoIIIE Location: 10215-10461 bp Feature: domain Description: FtsK_SpoIIIE Location: 1 021 5-1 0461 bp Feature: gene Location: 10642-10977 bp Feature: domain Description: RelB_DinJ Location: 10846-10969 bp Feature: domain Description: RelB_DinJ Location: 1 0846-1 0969 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Zeta_toxin (pfam06414), RVT-GII, HNHc (smart00507), group_II_RT_mat (TIGR04416), FtsK_SpoIIIE (pfam01580), RelB_DinJ (TIGR02384)

Seq: KZ855291.1 Enterococcus faecium strain IHC38 genomic scaffold IHC38_contig_144_consensus, whole genome shotgun sequence (19155 bp)
Overview 1 RT 1: 3598-14509 bp Neighborhood of RT #1 [3598, 14517] ArdA RVT-GII HNHc HTH_XRE Rol_Rep_N Rep_trans Dcm FtsK RVT-GII HNHc FtsK_SpoIIIE RelB_DinJ Feature: gene Location: 3598-4101 bp Feature: domain Description: ArdA Location: 3616-4087 bp Feature: domain Description: ArdA Location: 3616-4087 bp Feature: gene Location: 4114-4266 bp Feature: gene Location: 4442-6352 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4775-5513 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4775-5513 bp Feature: domain Description: HNHc Note: nucleases Location: 6068-6233 bp Feature: domain Description: HNHc Note: nucleases Location: 6068-62 33 bp Feature: gene Location: 7232-8416 bp Feature: domain Description: HTH_XRE Location: 7262-7406 bp Feature: domain Description: HTH_XRE Location: 72 62 -7406 bp Feature: domain Description: Rol_Rep_N Location: 7439-7703 bp Feature: domain Description: Rol_Rep_N Location: 7439-7703 bp Feature: domain Description: Rep_trans Location: 7727-8339 bp Feature: domain Description: Rep_trans Location: 772 7-8339 bp Feature: gene Location: 8951-10093 bp Feature: domain Description: Dcm Location: 8954-10067 bp Feature: domain Description: Dcm Location: 8954-10067 bp Feature: gene Location: 10138-10518 bp Feature: domain Description: FtsK Location: 10153-10393 bp Feature: domain Description: FtsK Location: 10153-10393 bp Feature: gene Location: 10620-12494 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10986-11682 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10986-11682 bp Feature: domain Description: HNHc Note: nucleases Location: 12222-12381 bp Feature: domain Description: HNHc Note: nucleases Location: 12 2 2 2 -12 381 bp Feature: gene Location: 13088-14119 bp Feature: domain Description: FtsK_SpoIIIE Location: 13760-14000 bp Feature: domain Description: FtsK_SpoIIIE Location: 13760-14000 bp Feature: gene Location: 14173-14517 bp Feature: domain Description: RelB_DinJ Location: 14383-14509 bp Feature: domain Description: RelB_DinJ Location: 14383-14509 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdA (pfam07275), RVT-GII, HNHc (smart00507), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), Dcm (COG0270), FtsK (COG1674), FtsK_SpoIIIE (pfam01580), RelB_DinJ (TIGR02384)

Seq: KZ855294.1 Enterococcus faecium strain IHC38 genomic scaffold IHC38_contig_147_consensus, whole genome shotgun sequence (3259 bp)
Overview 1 RT 1: 1-3242 bp Neighborhood of RT #1 [1, 3256] RVT-AbiP2 HsdM Feature: gene Location: 1-1458 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 331-796 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 3 3 1-796 bp Feature: gene Location: 1796-3256 bp Feature: domain Description: HsdM Location: 1817-3242 bp Feature: domain Description: HsdM Location: 1817-3 242 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, HsdM (COG0286)