myRT

myRT report for GCA_003353435.1_ASM335343v1

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Seq: QRBK01000002.1 UNVERIFIED_ORG: Idiomarina abyssalis strain 017G.2 Ga0227261_102, whole genome shotgun sequence (200931 bp)
Overview 1 RT 1: 83923-89410 bp Neighborhood of RT #1 [83923, 89838] AAA_15 TOPRIM_OLD RVT-Retrons Phage_GPA Feature: gene Location: 83923-85737 bp Feature: domain Description: AAA_15 Location: 83926-85081 bp Feature: domain Description: AAA_1 5 Location: 83926-85081 bp Feature: domain Description: TOPRIM_OLD Location: 85249-85474 bp Feature: domain Description: TOPRIM_OLD Location: 85249-85474 bp Feature: gene Location: 85796-86014 bp Feature: gene Location: 86065-87027 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 86221-86773 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 86221 -86773 bp Feature: gene Location: 87174-88079 bp Feature: gene Location: 88204-89838 bp Feature: domain Description: Phage_GPA Location: 88570-89410 bp Feature: domain Description: Phage_GPA Location: 88570-8941 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), TOPRIM_OLD (cd01026), RVT-Retrons, Phage_GPA (pfam05840)

Seq: QRBK01000008.1 UNVERIFIED_ORG: Idiomarina abyssalis strain 017G.2 Ga0227261_108, whole genome shotgun sequence (148897 bp)
Overview 1 RT 1: 142095-145501 bp Neighborhood of RT #1 [142095, 145501] PRK04247 RVT-Retrons Feature: gene Location: 142095-142691 bp Feature: gene Location: 142827-143039 bp Feature: domain Description: PRK04247 Location: 142839-143013 bp Feature: domain Description: PRK042 47 Location: 142 839-143013 bp Feature: gene Location: 143108-144136 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 143336-143852 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 143336-143852 bp Feature: gene Location: 144294-144635 bp Feature: gene Location: 144638-145501 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK04247 (endonuclease NucS), RVT-Retrons