myRT

myRT report for GCA_003353605.1_ASM335360v1

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Seq: QRAU01000007.1 Serratia fonticola strain E2309 Ga0222398_107, whole genome shotgun sequence (232706 bp)
Overview 1 RT 1: 27313-29758 bp Neighborhood of RT #1 [27313, 29758] RVT-Retrons Feature: gene Location: 27313-27549 bp Feature: gene Location: 27684-27902 bp Feature: gene Location: 28301-29260 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 28478-29003 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 28478-29003 bp Feature: gene Location: 29277-29480 bp Feature: gene Location: 29564-29758 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: QRAU01000016.1 Serratia fonticola strain E2309 Ga0222398_116, whole genome shotgun sequence (111805 bp)
Overview 1 RT 1: 107869-111786 bp Neighborhood of RT #1 [107869, 111803] HTH_39 RVT-Retrons TIR_2 Pox_D5 Feature: gene Location: 107869-108051 bp Feature: gene Location: 108322-108948 bp Feature: domain Description: HTH_39 Location: 108754-108937 bp Feature: domain Description: HTH_39 Location: 108754-108937 bp Feature: gene Location: 109099-110739 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 109417-110014 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 109417-110014 bp Feature: domain Description: TIR_2 Location: 110341-110677 bp Feature: domain Description: TIR_2 Location: 110341-110677 bp Feature: gene Location: 111279-111422 bp Feature: gene Location: 111561-111803 bp Feature: domain Description: Pox_D5 Location: 111579-111786 bp Feature: domain Description: Pox_D5 Location: 111579-111786 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_39 (pfam14090), RVT-Retrons, TIR_2 (pfam13676), Pox_D5 (pfam03288)

Seq: QRAU01000026.1 Serratia fonticola strain E2309 Ga0222398_126, whole genome shotgun sequence (65985 bp)
Overview 1 RT 1: 43759-49958 bp Neighborhood of RT #1 [43759, 49969] RVT-UG4 FimD FimC Feature: gene Location: 43759-44049 bp Feature: gene Location: 44152-44307 bp Feature: gene Location: 44404-46461 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 44794-45232 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 44794-4523 2 bp Feature: gene Location: 46553-49192 bp Feature: domain Description: FimD Location: 46652-49190 bp Feature: domain Description: FimD Location: 46652-49190 bp Feature: gene Location: 49217-49969 bp Feature: domain Description: FimC Location: 49241-49958 bp Feature: domain Description: FimC Location: 49241-49958 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, FimD (COG3188), FimC (COG3121)