myRT

myRT report for GCA_003353725.1_ASM335372v1

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Seq: PIWB01000728.1 Deltaproteobacteria bacterium isolate Glo_20 GloG15_CONTIG101903, whole genome shotgun sequence (2251 bp)
Overview 1 RT 1: 1-1246 bp Neighborhood of RT #1 [1, 2208] RVT-GII Feature: gene Location: 1-2208 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 610-1246 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61 0-1 246 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PIWB01000748.1 Deltaproteobacteria bacterium isolate Glo_20 GloG15_CONTIG107165, whole genome shotgun sequence (2183 bp)
Overview 1 RT 1: 1-915 bp Neighborhood of RT #1 [1, 2000] RT_nLTR_like RVT-CRISPR-like Feature: gene Location: 1-555 bp Feature: domain Description: RT_nLTR_like Location: 289-523 bp Feature: domain Description: RT_nLTR_like Location: 2 89-52 3 bp Feature: gene Location: 666-2000 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 693-915 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 693-915 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RT_nLTR_like (cd01650), RVT-CRISPR

Seq: PIWB01002098.1 Deltaproteobacteria bacterium isolate Glo_20 GloG15_CONTIG1137814, whole genome shotgun sequence (512 bp)
Overview 1 RT 1: 2-266 bp Neighborhood of RT #1 [2, 511] RVT-UNC Feature: gene Location: 2-511 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 74-266 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 74-266 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11/RVT-GII/RVT-UG28/RVT-CRISPR(RVT-UNC)

Seq: PIWB01000830.1 Deltaproteobacteria bacterium isolate Glo_20 GloG15_CONTIG133040, whole genome shotgun sequence (1912 bp)
Overview 1 RT 1: 104-1295 bp Neighborhood of RT #1 [104, 1909] RVT-UNC Feature: gene Location: 104-1909 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 659-1295 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 659-1295 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG10/RVT-GII/RVT-DGRs/RVT-UG28(RVT-UNC)

Seq: PIWB01000328.1 Deltaproteobacteria bacterium isolate Glo_20 GloG15_CONTIG24048, whole genome shotgun sequence (5364 bp)
Overview 1 RT 1: 3-5184 bp Neighborhood of RT #1 [3, 5363] L1-EN RVT-UNC zf-RVT HSBP1 Transposase_22 Feature: gene Location: 3-137 bp Feature: gene Location: 141-3977 bp Feature: domain Description: L1-EN Location: 174-858 bp Feature: domain Description: L1-EN Location: 174-85 8 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1791-2421 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1791-2421 bp Feature: domain Description: zf-RVT Location: 3522-3690 bp Feature: domain Description: zf-RVT Location: 35 22-3690 bp Feature: gene Location: 4089-4376 bp Feature: gene Location: 4638-5363 bp Feature: domain Description: HSBP1 Location: 4758-4857 bp Feature: domain Description: HSBP1 Location: 475 8-485 7 bp Feature: domain Description: Transposase_22 Location: 4953-5184 bp Feature: domain Description: Transposase_22 Location: 495 3-5 184 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RVT-CRISPR/RVT-GII/RVT-UG27(RVT-UNC), zf-RVT (pfam13966), HSBP1 (pfam06825), Transposase_22 (pfam02994)

Seq: PIWB01000332.1 Deltaproteobacteria bacterium isolate Glo_20 GloG15_CONTIG25094, whole genome shotgun sequence (5221 bp)
Overview 1 RT 1: 1211-5176 bp Neighborhood of RT #1 [1211, 5176] RVT_N RVT-GII GIIM Feature: gene Location: 1211-1789 bp Feature: gene Location: 2063-2680 bp Feature: gene Location: 2791-4404 bp Feature: domain Description: RVT_N Location: 3001-3244 bp Feature: domain Description: RVT_N Location: 3001-3244 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3289-3916 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3289-3916 bp Feature: domain Description: GIIM Note: maturase Location: 3967-4201 bp Feature: domain Description: GIIM Note: maturase Location: 396 7-4201 bp Feature: gene Location: 4524-4799 bp Feature: gene Location: 4889-5176 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: PIWB01001181.1 Deltaproteobacteria bacterium isolate Glo_20 GloG15_CONTIG264942, whole genome shotgun sequence (1246 bp)
Overview 1 RT 1: 3-1011 bp Neighborhood of RT #1 [3, 1011] RVT-UNC RAYT Feature: gene Location: 3-155 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 6-84 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 6-84 bp Feature: gene Location: 189-617 bp Feature: domain Description: RAYT Location: 201-585 bp Feature: domain Description: RAYT Location: 201-585 bp Feature: gene Location: 784-1011 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7/RVT-DGRs/RVT-UG4/RVT-UG18(RVT-UNC), RAYT (COG1943)

Seq: PIWB01000402.1 Deltaproteobacteria bacterium isolate Glo_20 GloG15_CONTIG35934, whole genome shotgun sequence (4201 bp)
Overview 1 RT 1: 1-3785 bp Neighborhood of RT #1 [1, 4051] L1-EN RVT-UNC zf-RVT Feature: gene Location: 1-258 bp Feature: gene Location: 569-4051 bp Feature: domain Description: L1-EN Location: 572-962 bp Feature: domain Description: L1-EN Location: 572-962 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1892-2531 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 18 92-2531 bp Feature: domain Description: zf-RVT Location: 3617-3785 bp Feature: domain Description: zf-RVT Location: 3617-378 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RVT-GII/RVT-DGRs/RVT-UG11(RVT-UNC), zf-RVT (pfam13966)

Seq: PIWB01001382.1 Deltaproteobacteria bacterium isolate Glo_20 GloG15_CONTIG380160, whole genome shotgun sequence (994 bp)
Overview 1 RT 1: 1-967 bp Neighborhood of RT #1 [1, 993] RVT-CRISPR-like Feature: gene Location: 1-993 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 379-967 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 379 -9 67 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: PIWB01001505.1 Deltaproteobacteria bacterium isolate Glo_20 GloG15_CONTIG464555, whole genome shotgun sequence (877 bp)
Overview 1 RT 1: 76-868 bp Neighborhood of RT #1 [76, 876] RVT-UNC Feature: gene Location: 76-876 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 454-868 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 454-868 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG25/RVT-GII/RVT-CRISPR(RVT-UNC)

Seq: PIWB01000486.1 Deltaproteobacteria bacterium isolate Glo_20 GloG15_CONTIG50871, whole genome shotgun sequence (3419 bp)
Overview 1 RT 1: 740-2714 bp Neighborhood of RT #1 [740, 2714] PEP-CTERM RVT-UG4 Feature: gene Location: 740-1354 bp Feature: domain Description: PEP-CTERM Location: 1274-1343 bp Feature: domain Description: PEP-CTERM Location: 1274-1343 bp Feature: gene Location: 1389-1619 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1392-1545 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1392-1545 bp Feature: gene Location: 2134-2325 bp Feature: gene Location: 2493-2714 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PEP-CTERM, RVT-UG4

Seq: PIWB01001600.1 Deltaproteobacteria bacterium isolate Glo_20 GloG15_CONTIG548341, whole genome shotgun sequence (792 bp)
Overview 1 RT 1: 3-291 bp Neighborhood of RT #1 [3, 791] RVT-GII Feature: gene Location: 3-791 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18-291 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18-291 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PIWB01000547.1 Deltaproteobacteria bacterium isolate Glo_20 GloG15_CONTIG61044, whole genome shotgun sequence (3063 bp)
Overview 1 RT 1: 634-2746 bp Neighborhood of RT #1 [634, 3060] RVT-UNC zf-RVT Feature: gene Location: 634-3060 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 883-1525 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 883-1525 bp Feature: domain Description: zf-RVT Location: 2551-2746 bp Feature: domain Description: zf-RVT Location: 2551-2746 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11/RVT-GII/RVT-CRISPR(RVT-UNC), zf-RVT (pfam13966)

Seq: PIWB01000587.1 Deltaproteobacteria bacterium isolate Glo_20 GloG15_CONTIG69073, whole genome shotgun sequence (2842 bp)
Overview 1 RT 1: 484-2716 bp Neighborhood of RT #1 [484, 2718] RVT-CRISPR-like zf-RVT RVT-GII Feature: gene Location: 484-1776 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 499-760 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 499-760 bp Feature: domain Description: zf-RVT Location: 1405-1621 bp Feature: domain Description: zf-RVT Location: 14 05-1621 bp Feature: gene Location: 1858-2718 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2455-2716 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2455-2716 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, zf-RVT (pfam13966), RVT-GII

Seq: PIWB01000592.1 Deltaproteobacteria bacterium isolate Glo_20 GloG15_CONTIG69818, whole genome shotgun sequence (2824 bp)
Overview 1 RT 1: 235-2317 bp Neighborhood of RT #1 [235, 2607] RVT-CRISPR-like zf-RVT Feature: gene Location: 235-2607 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 433-1063 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 433-1063 bp Feature: domain Description: zf-RVT Location: 2137-2317 bp Feature: domain Description: zf-RVT Location: 2137-2317 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, zf-RVT (pfam13966)

Seq: PIWB01000601.1 Deltaproteobacteria bacterium isolate Glo_20 GloG15_CONTIG71008, whole genome shotgun sequence (2796 bp)
Overview 1 RT 1: 347-2618 bp Neighborhood of RT #1 [347, 2638] L1-EN RVT-UNC Feature: gene Location: 347-2638 bp Feature: domain Description: L1-EN Location: 374-1061 bp Feature: domain Description: L1-EN Location: 374-1061 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1985-2618 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1985-2618 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RVT-UG27/RVT-GII/RVT-DGRs(RVT-UNC)

Seq: PIWB01000602.1 Deltaproteobacteria bacterium isolate Glo_20 GloG15_CONTIG71045, whole genome shotgun sequence (2795 bp)
Overview 1 RT 1: 123-2772 bp Neighborhood of RT #1 [123, 2792] RVT-UNC zf-RVT Feature: gene Location: 123-2792 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 870-1503 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 870-1503 bp Feature: domain Description: zf-RVT Location: 2535-2772 bp Feature: domain Description: zf-RVT Location: 2535-2772 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27/RVT-GII/RVT-UG28(RVT-UNC), zf-RVT (pfam13966)

Seq: PIWB01000622.1 Deltaproteobacteria bacterium isolate Glo_20 GloG15_CONTIG74173, whole genome shotgun sequence (2725 bp)
Overview 1 RT 1: 153-1271 bp Neighborhood of RT #1 [153, 2554] RpmD RVT-UNC Feature: gene Location: 153-380 bp Feature: domain Description: RpmD Location: 243-321 bp Feature: domain Description: RpmD Location: 243-321 bp Feature: gene Location: 395-2554 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 644-1271 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 644-1271 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RpmD (COG1841), RVT-UG11/RVT-DGRs/RVT-GII/RVT-Retrons(RVT-UNC)

Seq: PIWB01000632.1 Deltaproteobacteria bacterium isolate Glo_20 GloG15_CONTIG76419, whole genome shotgun sequence (2677 bp)
Overview 1 RT 1: 3-1254 bp Neighborhood of RT #1 [3, 2276] RVT-UNC Feature: gene Location: 3-2276 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 615-1254 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 615-1254 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG1/RVT-GII/RVT-CRISPR(RVT-UNC)