myRT

myRT report for GCA_003353785.1_ASM335378v1

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Seq: PIVX01000127.1 Gammaproteobacteria bacterium isolate Glo_16 GloG15_CONTIG117023, whole genome shotgun sequence (2069 bp)
Overview 1 RT 1: 2-1893 bp Neighborhood of RT #1 [2, 2066] RVT-UNC Baculo_p47 Feature: gene Location: 2-1363 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 698-1334 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 698-1 334 bp Feature: gene Location: 1293-2066 bp Feature: domain Description: Baculo_p47 Location: 1659-1893 bp Feature: domain Description: Baculo_p47 Location: 1 659-1 893 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII/RVT-CRISPR/RVT-UG3(RVT-UNC), Baculo_p47 (pfam05112)

Seq: PIVX01000160.1 Gammaproteobacteria bacterium isolate Glo_16 GloG15_CONTIG168500, whole genome shotgun sequence (1653 bp)
Overview 1 RT 1: 3-1326 bp Neighborhood of RT #1 [3, 1652] RVT-UNC RNase_HI_RT_Ty3 Feature: gene Location: 3-1652 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 477-678 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 477-678 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 963-1326 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 963-132 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11/RVT-DGRs/RVT-GII/RVT-UG26(RVT-UNC), RNase_HI_RT_Ty3 (cd09274)

Seq: PIVX01000187.1 Gammaproteobacteria bacterium isolate Glo_16 GloG15_CONTIG212789, whole genome shotgun sequence (1430 bp)
Overview 1 RT 1: 3-1398 bp Neighborhood of RT #1 [3, 1427] RVT-UNC Feature: gene Location: 3-1427 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 930-1398 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 93 0-13 98 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR/RVT-GII/RVT-DGRs/RVT-UG1(RVT-UNC)

Seq: PIVX01000069.1 Gammaproteobacteria bacterium isolate Glo_16 GloG15_CONTIG23857, whole genome shotgun sequence (5392 bp)
Overview 1 RT 1: 318-5094 bp Neighborhood of RT #1 [318, 5144] Nape_like_AP-endo RVT-GII IncA Feature: gene Location: 318-3707 bp Feature: domain Description: Nape_like_AP-endo Location: 357-804 bp Feature: domain Description: Nape_like_AP-endo Location: 357-804 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1914-2589 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1914 -2589 bp Feature: gene Location: 3897-5144 bp Feature: domain Description: IncA Location: 4893-5094 bp Feature: domain Description: IncA Location: 4 893-5094 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nape_like_AP-endo (cd10281), RVT-GII, IncA

Seq: PIVX01000081.1 Gammaproteobacteria bacterium isolate Glo_16 GloG15_CONTIG36182, whole genome shotgun sequence (4183 bp)
Overview 1 RT 1: 3-4169 bp Neighborhood of RT #1 [3, 4169] XthA RVT-GII Feature: gene Location: 3-3218 bp Feature: domain Description: XthA Location: 15-408 bp Feature: domain Description: XthA Location: 15 -408 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1560-2226 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15 60-2226 bp Feature: gene Location: 3582-4169 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT XthA (COG0708), RVT-GII

Seq: PIVX01000461.1 Gammaproteobacteria bacterium isolate Glo_16 GloG15_CONTIG589506, whole genome shotgun sequence (758 bp)
Overview 1 RT 1: 1-572 bp Neighborhood of RT #1 [1, 622] RVT-CRISPR-like Feature: gene Location: 1-399 bp Feature: gene Location: 266-622 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 383-572 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 383-572 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: PIVX01000519.1 Gammaproteobacteria bacterium isolate Glo_16 GloG15_CONTIG684731, whole genome shotgun sequence (692 bp)
Overview 1 RT 1: 3-453 bp Neighborhood of RT #1 [3, 689] RVT-UNC Feature: gene Location: 3-689 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 18-453 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 18-453 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR/RVT-GII/RVT-UG10(RVT-UNC)

Seq: PIVX01000552.1 Gammaproteobacteria bacterium isolate Glo_16 GloG15_CONTIG721833, whole genome shotgun sequence (670 bp)
Overview 1 RT 1: 2-669 bp Neighborhood of RT #1 [2, 669] RVT-CRISPR-like Feature: gene Location: 2-262 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 44-176 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 44-176 bp Feature: gene Location: 433-669 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: PIVX01000045.1 Gammaproteobacteria bacterium isolate Glo_16 GloG15_CONTIG8426, whole genome shotgun sequence (10408 bp)
Overview 1 RT 1: 280-9737 bp Neighborhood of RT #1 [280, 9737] exoDNase_III RVT-GII Feature: gene Location: 280-3900 bp Feature: domain Description: exoDNase_III Location: 361-790 bp Feature: domain Description: exoDNase_III Location: 361-79 0 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1969-2626 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19 69 -2626 bp Feature: gene Location: 4011-9737 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT exoDNase_III (TIGR00195), RVT-GII