myRT

myRT report for GCA_003353855.1_ASM335385v1

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Seq: PIVS01001213.1 Desulfobacteraceae bacterium isolate Glo_11 GloG15_CONTIG1010092, whole genome shotgun sequence (549 bp)
Overview 1 RT 1: 3-168 bp Neighborhood of RT #1 [3, 386] RVT-UG4 Feature: gene Location: 3-386 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 6-168 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 6-1 68 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4

Seq: PIVS01001227.1 Desulfobacteraceae bacterium isolate Glo_11 GloG15_CONTIG1043760, whole genome shotgun sequence (539 bp)
Overview 1 RT 1: 1-355 bp Neighborhood of RT #1 [1, 537] RVT-GII GIIM Feature: gene Location: 1-537 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-100 bp Feature: domain Description: GIIM Note: maturase Location: 148-355 bp Feature: domain Description: GIIM Note: maturase Location: 148-355 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PIVS01000889.1 Desulfobacteraceae bacterium isolate Glo_11 GloG15_CONTIG223156, whole genome shotgun sequence (1387 bp)
Overview 1 RT 1: 228-1367 bp Neighborhood of RT #1 [228, 1384] group_II_RT_mat RVT-GII GIIM Feature: gene Location: 228-650 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 435-639 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 43 5-63 9 bp Feature: gene Location: 653-1384 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 656-1058 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 656-1058 bp Feature: domain Description: GIIM Note: maturase Location: 1142-1367 bp Feature: domain Description: GIIM Note: maturase Location: 1142-13 67 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII, GIIM (pfam08388)

Seq: PIVS01000362.1 Desulfobacteraceae bacterium isolate Glo_11 GloG15_CONTIG25446, whole genome shotgun sequence (5173 bp)
Overview 1 RT 1: 2-1360 bp Neighborhood of RT #1 [2, 1908] RVT-GII AdoMet_MTases DLH Feature: gene Location: 2-151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-152 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-152 bp Feature: gene Location: 257-949 bp Feature: domain Description: AdoMet_MTases Location: 398-806 bp Feature: domain Description: AdoMet_MTases Location: 398-806 bp Feature: gene Location: 931-1908 bp Feature: domain Description: DLH Location: 937-1360 bp Feature: domain Description: DLH Location: 937-1360 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, AdoMet_MTases (cl17173), DLH (pfam01738)

Seq: PIVS01000393.1 Desulfobacteraceae bacterium isolate Glo_11 GloG15_CONTIG28759, whole genome shotgun sequence (4792 bp)
Overview 1 RT 1: 96-2933 bp Neighborhood of RT #1 [96, 2998] RVT-GII Phage_int_SAM_1 INT_RitC_C_like INT_RitB_C_like Feature: gene Location: 96-392 bp Feature: gene Location: 419-1105 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 689-1076 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 689-1076 bp Feature: gene Location: 1183-2196 bp Feature: domain Description: Phage_int_SAM_1 Location: 1231-1480 bp Feature: domain Description: Phage_int_SAM_1 Location: 1231-1480 bp Feature: domain Description: INT_RitC_C_like Location: 1561-2116 bp Feature: domain Description: INT_RitC_C_like Location: 15 61-2116 bp Feature: gene Location: 2183-2998 bp Feature: domain Description: INT_RitB_C_like Location: 2348-2933 bp Feature: domain Description: INT_RitB_C_like Location: 2348-2933 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Phage_int_SAM_1 (pfam02899), INT_RitC_C_like (cd01182), INT_RitB_C_like (cd00797)

Seq: PIVS01000964.1 Desulfobacteraceae bacterium isolate Glo_11 GloG15_CONTIG317790, whole genome shotgun sequence (1111 bp)
Overview 1 RT 1: 3-996 bp Neighborhood of RT #1 [3, 1094] RVT-GII GIIM Feature: gene Location: 3-1094 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 159-810 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 159-810 bp Feature: domain Description: GIIM Note: maturase Location: 891-996 bp Feature: domain Description: GIIM Note: maturase Location: 891-996 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PIVS01000047.1 Desulfobacteraceae bacterium isolate Glo_11 GloG15_CONTIG3850, whole genome shotgun sequence (17413 bp)
Overview 1 RT 1: 15611-17315 bp Neighborhood of RT #1 [15611, 17356] PRK05718 RVT-GII Feature: gene Location: 15611-16237 bp Feature: domain Description: PRK05718 Location: 15620-16220 bp Feature: domain Description: PRK057 18 Location: 15620-16220 bp Feature: gene Location: 16468-16740 bp Feature: gene Location: 17033-17356 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17039-17315 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17 039-17 315 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05718 (keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional), RVT-GII

Seq: PIVS01001034.1 Desulfobacteraceae bacterium isolate Glo_11 GloG15_CONTIG441549, whole genome shotgun sequence (905 bp)
Overview 1 RT 1: 317-683 bp Neighborhood of RT #1 [317, 712] RVT-GII Feature: gene Location: 317-712 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 488-683 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48 8 -68 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PIVS01001047.1 Desulfobacteraceae bacterium isolate Glo_11 GloG15_CONTIG465495, whole genome shotgun sequence (876 bp)
Overview 1 RT 1: 3-795 bp Neighborhood of RT #1 [3, 875] TOMM_pelo RVT-UG4 Feature: gene Location: 3-302 bp Feature: domain Description: TOMM_pelo Location: 36-249 bp Feature: domain Description: TOMM_pelo Location: 36-249 bp Feature: gene Location: 390-875 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 393-795 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 39 3-79 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TOMM_pelo (TIGR03793), RVT-UG4

Seq: PIVS01000516.1 Desulfobacteraceae bacterium isolate Glo_11 GloG15_CONTIG46743, whole genome shotgun sequence (3595 bp)
Overview 1 RT 1: 309-3386 bp Neighborhood of RT #1 [309, 3386] NodS PLN02775 RVT-GII GIIM Feature: gene Location: 309-572 bp Feature: domain Description: NodS Location: 333-501 bp Feature: domain Description: NodS Location: 333-501 bp Feature: gene Location: 855-1508 bp Feature: domain Description: PLN02775 Location: 1164-1503 bp Feature: domain Description: PLN02775 Location: 1164-1503 bp Feature: gene Location: 1969-2262 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2017-2209 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2017-2209 bp Feature: gene Location: 2297-2569 bp Feature: domain Description: GIIM Note: maturase Location: 2348-2495 bp Feature: domain Description: GIIM Note: maturase Location: 2348-2495 bp Feature: gene Location: 2799-3386 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NodS (pfam05401), PLN02775 (Probable dihydrodipicolinate reductase), RVT-GII, GIIM (pfam08388)

Seq: PIVS01000561.1 Desulfobacteraceae bacterium isolate Glo_11 GloG15_CONTIG55856, whole genome shotgun sequence (3232 bp)
Overview 1 RT 1: 907-3124 bp Neighborhood of RT #1 [907, 3225] RVT-GII RVT-GII GIIM PHA02517 Feature: gene Location: 907-1482 bp Feature: gene Location: 1572-1910 bp Feature: gene Location: 1882-2316 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1891-2269 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1891-2269 bp Feature: gene Location: 2324-2830 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2336-2549 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2336-2549 bp Feature: domain Description: GIIM Note: maturase Location: 2630-2828 bp Feature: domain Description: GIIM Note: maturase Location: 2630-2828 bp Feature: gene Location: 2989-3225 bp Feature: domain Description: PHA02517 Location: 3019-3124 bp Feature: domain Description: PHA02517 Location: 3019-3124 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: PIVS01000584.1 Desulfobacteraceae bacterium isolate Glo_11 GloG15_CONTIG62402, whole genome shotgun sequence (3021 bp)
Overview 1 RT 1: 83-2155 bp Neighborhood of RT #1 [83, 2508] RVT-GII Feature: gene Location: 83-748 bp Feature: gene Location: 1222-2508 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1483-2155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1483-2155 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PIVS01000660.1 Desulfobacteraceae bacterium isolate Glo_11 GloG15_CONTIG83524, whole genome shotgun sequence (2536 bp)
Overview 1 RT 1: 172-2533 bp Neighborhood of RT #1 [172, 2533] RVT-GII GIIM Feature: gene Location: 172-759 bp Feature: gene Location: 862-2004 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1132-1750 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 113 2-1750 bp Feature: domain Description: GIIM Note: maturase Location: 1801-1981 bp Feature: domain Description: GIIM Note: maturase Location: 1801-1981 bp Feature: gene Location: 2125-2268 bp Feature: gene Location: 2369-2533 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)