myRT

myRT report for GCA_003353955.1_ASM335395v1

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Seq: PIVJ01000269.1 Bacteroidetes bacterium isolate Glo_2 GloG15_CONTIG120901, whole genome shotgun sequence (2029 bp)
Overview 1 RT 1: 5-1843 bp Neighborhood of RT #1 [5, 1917] RVT-GII GIIM Feature: gene Location: 5-301 bp Feature: gene Location: 550-1917 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 880-1546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 880-1 546 bp Feature: domain Description: GIIM Note: maturase Location: 1627-1843 bp Feature: domain Description: GIIM Note: maturase Location: 1 627-1 843 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PIVJ01000294.1 Bacteroidetes bacterium isolate Glo_2 GloG15_CONTIG140529, whole genome shotgun sequence (1849 bp)
Overview 1 RT 1: 2-956 bp Neighborhood of RT #1 [2, 1342] RVT-UNC Feature: gene Location: 2-1342 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 485-956 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 485-956 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs/RVT-UG2/RVT-GII/RVT-UG19(RVT-UNC)

Seq: PIVJ01000333.1 Bacteroidetes bacterium isolate Glo_2 GloG15_CONTIG166791, whole genome shotgun sequence (1664 bp)
Overview 1 RT 1: 3-1119 bp Neighborhood of RT #1 [3, 1661] RVT-DGRs RNase_HI_RT_Ty3 Feature: gene Location: 3-1661 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 303-480 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3 03 -480 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 771-1119 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 771-1119 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, RNase_HI_RT_Ty3 (cd09274)

Seq: PIVJ01000459.1 Bacteroidetes bacterium isolate Glo_2 GloG15_CONTIG293178, whole genome shotgun sequence (1168 bp)
Overview 1 RT 1: 1-1166 bp Neighborhood of RT #1 [1, 1166] RVT-GII Feature: gene Location: 1-741 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 361-742 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 361-74 2 bp Feature: gene Location: 924-1166 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PIVJ01000461.1 Bacteroidetes bacterium isolate Glo_2 GloG15_CONTIG294475, whole genome shotgun sequence (1165 bp)
Overview 1 RT 1: 3-570 bp Neighborhood of RT #1 [3, 575] RVT-GII Feature: gene Location: 3-575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 216-570 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 216-5 70 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PIVJ01000493.1 Bacteroidetes bacterium isolate Glo_2 GloG15_CONTIG325242, whole genome shotgun sequence (1095 bp)
Overview 1 RT 1: 2-641 bp Neighborhood of RT #1 [2, 641] RVT-GII Feature: gene Location: 2-415 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26-401 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26 -401 bp Feature: gene Location: 465-641 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PIVJ01000154.1 Bacteroidetes bacterium isolate Glo_2 GloG15_CONTIG40551, whole genome shotgun sequence (3915 bp)
Overview 1 RT 1: 2-3883 bp Neighborhood of RT #1 [2, 3883] Exo_endo_phos_2 RVT-UNC Feature: gene Location: 2-307 bp Feature: gene Location: 361-3657 bp Feature: domain Description: Exo_endo_phos_2 Location: 1069-1399 bp Feature: domain Description: Exo_endo_phos_2 Location: 1069-1399 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2377-2944 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 237 7 -2944 bp Feature: gene Location: 3692-3883 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Exo_endo_phos_2 (pfam14529), RVT-UG11/RVT-GII/RVT-CRISPR(RVT-UNC)

Seq: PIVJ01000160.1 Bacteroidetes bacterium isolate Glo_2 GloG15_CONTIG43589, whole genome shotgun sequence (3747 bp)
Overview 1 RT 1: 1-3433 bp Neighborhood of RT #1 [1, 3480] L1-EN RVT-UNC DUF1725 Feature: gene Location: 1-3480 bp Feature: domain Description: L1-EN Location: 4-364 bp Feature: domain Description: L1-EN Location: 4-364 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1237-1894 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1237-18 94 bp Feature: domain Description: DUF1725 Location: 3379-3433 bp Feature: domain Description: DUF1725 Location: 3379-3433 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RVT-UG11/RVT-GII/RVT-CRISPR(RVT-UNC), DUF1725 (pfam08333)

Seq: PIVJ01000697.1 Bacteroidetes bacterium isolate Glo_2 GloG15_CONTIG585939, whole genome shotgun sequence (760 bp)
Overview 1 RT 1: 2-425 bp Neighborhood of RT #1 [2, 757] RVT-UNC Feature: gene Location: 2-757 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 92-425 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 9 2-425 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5/RVT-UG28b/RVT-UG10/RVT-UG3(RVT-UNC)

Seq: PIVJ01000848.1 Bacteroidetes bacterium isolate Glo_2 GloG15_CONTIG826707, whole genome shotgun sequence (618 bp)
Overview 1 RT 1: 90-465 bp Neighborhood of RT #1 [90, 617] RVT-GII GIIM Feature: gene Location: 90-617 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96-195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96-195 bp Feature: domain Description: GIIM Note: maturase Location: 246-465 bp Feature: domain Description: GIIM Note: maturase Location: 246-465 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PIVJ01000240.1 Bacteroidetes bacterium isolate Glo_2 GloG15_CONTIG94004, whole genome shotgun sequence (2363 bp)
Overview 1 RT 1: 3-2271 bp Neighborhood of RT #1 [3, 2360] retropepsin_like RVT-UG17 RT_RNaseH_2 Feature: gene Location: 3-2360 bp Feature: domain Description: retropepsin_like Location: 276-543 bp Feature: domain Description: retropepsin_like Location: 276-543 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1605-1782 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1605-1782 bp Feature: domain Description: RT_RNaseH_2 Location: 1977-2271 bp Feature: domain Description: RT_RNaseH_2 Location: 1977-2271 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT retropepsin_like (cd00303), RVT-UG17, RT_RNaseH_2 (pfam17919)