myRT

myRT report for GCA_003354035.1_ASM335403v1

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Seq: PIVR01001234.1 Bacteroidetes bacterium isolate Glo_10 GloG15_CONTIG1014445, whole genome shotgun sequence (548 bp)
Overview 1 RT 1: 1-256 bp Neighborhood of RT #1 [1, 546] RVT-UNC Feature: gene Location: 1-546 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 40-256 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 40-256 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11/RVT-UG21/RVT-CRISPR/RVT-UG17(RVT-UNC)

Seq: PIVR01000376.1 Bacteroidetes bacterium isolate Glo_10 GloG15_CONTIG106456, whole genome shotgun sequence (2192 bp)
Overview 1 RT 1: 3-2037 bp Neighborhood of RT #1 [3, 2135] RVT-GII GIIM COG1373 Feature: gene Location: 3-791 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-354 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-354 bp Feature: domain Description: GIIM Note: maturase Location: 402-603 bp Feature: domain Description: GIIM Note: maturase Location: 402 -603 bp Feature: gene Location: 945-2135 bp Feature: domain Description: COG1373 Location: 999-2037 bp Feature: domain Description: COG1373 Location: 999-2 037 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG1373 (Predicted ATPase, AAA+ superfamily )

Seq: PIVR01000557.1 Bacteroidetes bacterium isolate Glo_10 GloG15_CONTIG236866, whole genome shotgun sequence (1336 bp)
Overview 1 RT 1: 1-748 bp Neighborhood of RT #1 [1, 1254] RVT-DGRs Feature: gene Location: 1-1254 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 487-748 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 487-748 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: PIVR01000198.1 Bacteroidetes bacterium isolate Glo_10 GloG15_CONTIG24007, whole genome shotgun sequence (5369 bp)
Overview 1 RT 1: 2-4399 bp Neighborhood of RT #1 [2, 4626] NnaC_like L1-EN RVT-GII zf-RVT Feature: gene Location: 2-751 bp Feature: domain Description: NnaC_like Location: 71-602 bp Feature: domain Description: NnaC_like Location: 71-602 bp Feature: gene Location: 922-4626 bp Feature: domain Description: L1-EN Location: 940-1642 bp Feature: domain Description: L1-EN Location: 94 0-164 2 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2491-3130 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24 91-3130 bp Feature: domain Description: zf-RVT Location: 4186-4399 bp Feature: domain Description: zf-RVT Location: 4 186-4 399 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NnaC_like (cd01841), L1-EN (cd09076), RVT-GII, zf-RVT (pfam13966)

Seq: PIVR01000202.1 Bacteroidetes bacterium isolate Glo_10 GloG15_CONTIG25698, whole genome shotgun sequence (5139 bp)
Overview 1 RT 1: 262-5137 bp Neighborhood of RT #1 [262, 5137] L1-EN RVT-GII zf-RVT Feature: gene Location: 262-4053 bp Feature: domain Description: L1-EN Location: 298-979 bp Feature: domain Description: L1-EN Location: 298-979 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1909-2605 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1909-2605 bp Feature: domain Description: zf-RVT Location: 3589-3787 bp Feature: domain Description: zf-RVT Location: 35 89-3787 bp Feature: gene Location: 4374-4823 bp Feature: gene Location: 4973-5137 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RVT-GII, zf-RVT (pfam13966)

Seq: PIVR01000230.1 Bacteroidetes bacterium isolate Glo_10 GloG15_CONTIG32827, whole genome shotgun sequence (4432 bp)
Overview 1 RT 1: 45-3940 bp Neighborhood of RT #1 [45, 4221] L1-EN RVT-UNC zf-RVT Feature: gene Location: 45-431 bp Feature: gene Location: 421-4221 bp Feature: domain Description: L1-EN Location: 442-1138 bp Feature: domain Description: L1-EN Location: 442-1138 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2068-2707 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 206 8-2707 bp Feature: domain Description: zf-RVT Location: 3739-3940 bp Feature: domain Description: zf-RVT Location: 3739-3940 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RVT-UG11/RVT-CRISPR/RVT-GII(RVT-UNC), zf-RVT (pfam13966)

Seq: PIVR01000085.1 Bacteroidetes bacterium isolate Glo_10 GloG15_CONTIG4674, whole genome shotgun sequence (15257 bp)
Overview 1 RT 1: 4657-11475 bp Neighborhood of RT #1 [4657, 11483] AvrPphF-ORF-2 sir2 SIR2_2 RVT-UG2 COG4447 COG4447 COG4447 Por_Secre_tail Feature: gene Location: 4657-5067 bp Feature: domain Description: AvrPphF-ORF-2 Location: 4909-5059 bp Feature: domain Description: AvrPphF-ORF-2 Location: 4909-5059 bp Feature: gene Location: 5469-6959 bp Feature: domain Description: sir2 Location: 5493-5763 bp Feature: domain Description: sir2 Location: 5493-57 63 bp Feature: domain Description: SIR2_2 Location: 5928-6357 bp Feature: domain Description: SIR2_2 Location: 5928-6357 bp Feature: gene Location: 6973-8619 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 7273-8236 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 7 27 3-8236 bp Feature: gene Location: 9161-9424 bp Feature: gene Location: 10248-11483 bp Feature: domain Description: COG4447 Location: 10323-10602 bp Feature: domain Description: COG4447 Location: 10323-10602 bp Feature: domain Description: COG4447 Location: 10665-10980 bp Feature: domain Description: COG4447 Location: 10665-10980 bp Feature: domain Description: COG4447 Location: 10998-11166 bp Feature: domain Description: COG4447 Location: 10998-11166 bp Feature: domain Description: Por_Secre_tail Location: 11247-11475 bp Feature: domain Description: Por_Secre_tail Location: 11247 -1147 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AvrPphF-ORF-2 (pfam09143), sir2 (LOAD_sir2), SIR2_2 (pfam13289), RVT-UG2, COG4447 (Uncharacterized protein related to plant photosystem II stability/assembly factor ), Por_Secre_tail (TIGR04183)

Seq: PIVR01000262.1 Bacteroidetes bacterium isolate Glo_10 GloG15_CONTIG49585, whole genome shotgun sequence (3471 bp)
Overview 1 RT 1: 3-3421 bp Neighborhood of RT #1 [3, 3421] Exo_endo_phos_2 RVT-UNC Feature: gene Location: 3-3134 bp Feature: domain Description: Exo_endo_phos_2 Location: 237-594 bp Feature: domain Description: Exo_endo_phos_2 Location: 237-594 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1467-2121 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1467-2121 bp Feature: gene Location: 3242-3421 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Exo_endo_phos_2 (pfam14529), RVT-UG11/RVT-GII/RVT-CRISPR(RVT-UNC)

Seq: PIVR01000001.1 Bacteroidetes bacterium isolate Glo_10 GloG15_CONTIG58, whole genome shotgun sequence (125683 bp)
Overview 1 RT 1: 76516-81710 bp Neighborhood of RT #1 [76516, 81710] SLC5sbd SLC5sbd RVT-UG28 Feature: gene Location: 76516-76929 bp Feature: gene Location: 76942-78654 bp Feature: domain Description: SLC5sbd Location: 76957-77572 bp Feature: domain Description: SLC5sbd Location: 769 57-77572 bp Feature: domain Description: SLC5sbd Location: 77710-78631 bp Feature: domain Description: SLC5sbd Location: 77710-78631 bp Feature: gene Location: 79067-80566 bp Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 79346-79988 bp Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 79 346-79 9 88 bp Feature: gene Location: 80808-80975 bp Feature: gene Location: 81510-81710 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLC5sbd (cd10322), RVT-UG28

Seq: PIVR01000281.1 Bacteroidetes bacterium isolate Glo_10 GloG15_CONTIG59088, whole genome shotgun sequence (3125 bp)
Overview 1 RT 1: 237-3080 bp Neighborhood of RT #1 [237, 3080] RVT-UNC Feature: gene Location: 237-2843 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1173-1791 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1173-1791 bp Feature: gene Location: 2946-3080 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11/RVT-GII/RVT-CRISPR(RVT-UNC)

Seq: PIVR01000348.1 Bacteroidetes bacterium isolate Glo_10 GloG15_CONTIG95672, whole genome shotgun sequence (2337 bp)
Overview 1 RT 1: 2-614 bp Neighborhood of RT #1 [2, 1198] RVT-UNC Feature: gene Location: 2-1198 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 23-614 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 23-614 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5/RVT-GII/RVT-CRISPR(RVT-UNC)