myRT

myRT report for GCA_003354055.1_ASM335405v1

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Seq: PIVQ01001038.1 Desulfobacteraceae bacterium isolate Glo_9 GloG15_CONTIG109536, whole genome shotgun sequence (2154 bp)
Overview 1 RT 1: 117-1374 bp Neighborhood of RT #1 [117, 1625] RVT_N RVT-GII GIIM Feature: gene Location: 117-1625 bp Feature: domain Description: RVT_N Location: 177-411 bp Feature: domain Description: RVT_N Location: 1 77-41 1 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 465-1086 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 465-1 086 bp Feature: domain Description: GIIM Note: maturase Location: 1140-1374 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 40-1 374 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: PIVQ01000561.1 Desulfobacteraceae bacterium isolate Glo_9 GloG15_CONTIG27583, whole genome shotgun sequence (4921 bp)
Overview 1 RT 1: 345-4238 bp Neighborhood of RT #1 [345, 4426] RVT-GII GIIM integrase_gron Zn_Tnp_IS91 Y2_Tnp Feature: gene Location: 345-1682 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 705-1329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 705-132 9 bp Feature: domain Description: GIIM Note: maturase Location: 1377-1587 bp Feature: domain Description: GIIM Note: maturase Location: 1377-1587 bp Feature: gene Location: 1951-3051 bp Feature: domain Description: integrase_gron Location: 2419-2953 bp Feature: domain Description: integrase_gron Location: 2 419-2 953 bp Feature: gene Location: 3254-4426 bp Feature: domain Description: Zn_Tnp_IS91 Location: 3284-3551 bp Feature: domain Description: Zn_Tnp_IS91 Location: 32 84-3551 bp Feature: domain Description: Y2_Tnp Location: 3680-4238 bp Feature: domain Description: Y2 _Tnp Location: 3680-42 38 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), integrase_gron (TIGR02249), Zn_Tnp_IS91 (pfam14319), Y2_Tnp (pfam04986)

Seq: PIVQ01001436.1 Desulfobacteraceae bacterium isolate Glo_9 GloG15_CONTIG321181, whole genome shotgun sequence (1104 bp)
Overview 1 RT 1: 3-990 bp Neighborhood of RT #1 [3, 990] RVT-GII Feature: gene Location: 3-542 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 357-537 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 57-53 7 bp Feature: gene Location: 838-990 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PIVQ01000613.1 Desulfobacteraceae bacterium isolate Glo_9 GloG15_CONTIG32330, whole genome shotgun sequence (4470 bp)
Overview 1 RT 1: 3-3699 bp Neighborhood of RT #1 [3, 3734] RVT-GII LZ_Tnp_IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C TnpB_IS66 Feature: gene Location: 3-1391 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 453-1143 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 53-114 3 bp Feature: gene Location: 1760-3325 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1922-2111 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1922-2111 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2303-3170 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2303-3170 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 3191-3305 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 3191-3305 bp Feature: gene Location: 3363-3734 bp Feature: domain Description: TnpB_IS66 Location: 3408-3699 bp Feature: domain Description: TnpB_IS66 Location: 34 08-3699 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, LZ_Tnp_IS66 (pfam13007), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), TnpB_IS66 (pfam05717)

Seq: PIVQ01001536.1 Desulfobacteraceae bacterium isolate Glo_9 GloG15_CONTIG427475, whole genome shotgun sequence (924 bp)
Overview 1 RT 1: 37-829 bp Neighborhood of RT #1 [37, 921] RVT-GII GIIM Feature: gene Location: 37-921 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40-562 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40-5 62 bp Feature: domain Description: GIIM Note: maturase Location: 613-829 bp Feature: domain Description: GIIM Note: maturase Location: 613-829 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PIVQ01000108.1 Desulfobacteraceae bacterium isolate Glo_9 GloG15_CONTIG4781, whole genome shotgun sequence (15029 bp)
Overview 1 RT 1: 1683-5197 bp Neighborhood of RT #1 [1683, 5197] DDE_Tnp_ISAZ013 RVT-GII Feature: gene Location: 1683-1946 bp Feature: gene Location: 2333-3589 bp Feature: domain Description: DDE_Tnp_ISAZ013 Location: 2669-3581 bp Feature: domain Description: DDE_Tnp_ISAZ013 Location: 26 6 9-3581 bp Feature: gene Location: 3606-4634 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3894-4551 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3894-4551 bp Feature: gene Location: 4702-4842 bp Feature: gene Location: 4850-5197 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_ISAZ013 (pfam07592), RVT-GII

Seq: PIVQ01000144.1 Desulfobacteraceae bacterium isolate Glo_9 GloG15_CONTIG6401, whole genome shotgun sequence (12416 bp)
Overview 1 RT 1: 6054-9144 bp Neighborhood of RT #1 [6054, 9144] RVT-GII group_II_RT_mat Feature: gene Location: 6054-6185 bp Feature: gene Location: 6274-6672 bp Feature: gene Location: 7239-8183 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7245-7845 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7 245-7 845 bp Feature: gene Location: 8212-8607 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 8401-8572 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 8401-857 2 bp Feature: gene Location: 8944-9144 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, group_II_RT_mat (TIGR04416)

Seq: PIVQ01000930.1 Desulfobacteraceae bacterium isolate Glo_9 GloG15_CONTIG78764, whole genome shotgun sequence (2628 bp)
Overview 1 RT 1: 2-2626 bp Neighborhood of RT #1 [2, 2626] RVT-GII GIIM Feature: gene Location: 2-457 bp Feature: gene Location: 470-958 bp Feature: gene Location: 955-2385 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1300-2035 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1300-2035 bp Feature: domain Description: GIIM Note: maturase Location: 2110-2320 bp Feature: domain Description: GIIM Note: maturase Location: 2110-2320 bp Feature: gene Location: 2372-2626 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PIVQ01000944.1 Desulfobacteraceae bacterium isolate Glo_9 GloG15_CONTIG82252, whole genome shotgun sequence (2558 bp)
Overview 1 RT 1: 6-2170 bp Neighborhood of RT #1 [6, 2379] RVT-GII GIIM Feature: gene Location: 6-242 bp Feature: gene Location: 554-829 bp Feature: gene Location: 1036-2379 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1297-1915 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 129 7-19 15 bp Feature: domain Description: GIIM Note: maturase Location: 1957-2170 bp Feature: domain Description: GIIM Note: maturase Location: 19 57-2170 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PIVQ01000972.1 Desulfobacteraceae bacterium isolate Glo_9 GloG15_CONTIG90223, whole genome shotgun sequence (2422 bp)
Overview 1 RT 1: 36-2420 bp Neighborhood of RT #1 [36, 2420] RVT-GII GIIM Feature: gene Location: 36-245 bp Feature: gene Location: 272-502 bp Feature: gene Location: 711-2045 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 990-1608 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 990-1608 bp Feature: domain Description: GIIM Note: maturase Location: 1650-1878 bp Feature: domain Description: GIIM Note: maturase Location: 1650-1878 bp Feature: gene Location: 2130-2420 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PIVQ01000242.1 Desulfobacteraceae bacterium isolate Glo_9 GloG15_CONTIG9680, whole genome shotgun sequence (9557 bp)
Overview 1 RT 1: 5633-9556 bp Neighborhood of RT #1 [5633, 9556] ARO8 RVT-GII GIIM Feature: gene Location: 5633-5809 bp Feature: gene Location: 5822-7003 bp Feature: domain Description: ARO8 Location: 5861-6998 bp Feature: domain Description: ARO8 Location: 5861-6998 bp Feature: gene Location: 7709-9019 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7979-8597 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7979-8597 bp Feature: domain Description: GIIM Note: maturase Location: 8648-8879 bp Feature: domain Description: GIIM Note: maturase Location: 8648-8879 bp Feature: gene Location: 9046-9369 bp Feature: gene Location: 9347-9556 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ARO8 (COG1167), RVT-GII, GIIM (pfam08388)

Seq: PIVQ01000991.1 Desulfobacteraceae bacterium isolate Glo_9 GloG15_CONTIG98173, whole genome shotgun sequence (2301 bp)
Overview 1 RT 1: 185-2298 bp Neighborhood of RT #1 [185, 2298] RVT-GII GIIM Feature: gene Location: 185-1495 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 455-1073 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 455-1073 bp Feature: domain Description: GIIM Note: maturase Location: 1124-1352 bp Feature: domain Description: GIIM Note: maturase Location: 112 4-1352 bp Feature: gene Location: 1526-1921 bp Feature: gene Location: 2143-2298 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)