myRT

myRT report for GCA_003357585.1_ASM335758v1

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Seq: QOMB01000026.1 Escherichia coli strain SC383 NODE_19_length_71717_cov_48.0596_ID_59, whole genome shotgun sequence (71717 bp)
Overview 1 RT 1: 420-6451 bp Neighborhood of RT #1 [420, 6451] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 420-1340 bp Feature: domain Description: AbiEii Location: 462-1203 bp Feature: domain Description: AbiEii Location: 462-1 203 bp Feature: gene Location: 1327-2130 bp Feature: domain Description: AbiEi_3_N Location: 1360-1621 bp Feature: domain Description: AbiEi_3_N Location: 1 360-1 621 bp Feature: domain Description: AbiEi_3 Location: 1633-2089 bp Feature: domain Description: AbiEi_3 Location: 1 633-2089 bp Feature: gene Location: 2425-5634 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2953-3442 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2953-3442 bp Feature: domain Description: nitrilase Location: 4948-5545 bp Feature: domain Description: nitrilase Location: 4948-5545 bp Feature: gene Location: 5795-5935 bp Feature: domain Description: Phage_ASH Location: 5822-5915 bp Feature: domain Description: Phage_ASH Location: 5822-591 5 bp Feature: gene Location: 5981-6451 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)

Seq: QOMB01000068.1 Escherichia coli strain SC383 NODE_3_length_454926_cov_49.4177_ID_11, whole genome shotgun sequence (454926 bp)
Overview 1 RT 1: 193589-196696 bp Neighborhood of RT #1 [193589, 196701] RVT-Retrons Q Feature: gene Location: 193589-193732 bp Feature: gene Location: 193840-193980 bp Feature: gene Location: 194048-195238 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 194198-194780 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 194198-194780 bp Feature: gene Location: 195235-195942 bp Feature: gene Location: 195985-196701 bp Feature: domain Description: Q Location: 195991-196696 bp Feature: domain Description: Q Location: 195991-196696 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Q (PHA02536)