myRT

myRT report for GCA_003357765.1_ASM335776v1

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Seq: QOMJ01000140.1 Escherichia coli strain SC375 NODE_16_length_117485_cov_103.039_ID_27, whole genome shotgun sequence (117485 bp)
Overview 1 RT 1: 40792-45061 bp Neighborhood of RT #1 [40792, 45066] Psu RVT-Retrons PRK09692 Feature: gene Location: 40792-41355 bp Feature: domain Description: Psu Location: 40810-41350 bp Feature: domain Description: Psu Location: 4081 0-41 350 bp Feature: gene Location: 41361-41504 bp Feature: gene Location: 41560-43044 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 42268-42823 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 42268-42823 bp Feature: gene Location: 43045-43695 bp Feature: gene Location: 43891-45066 bp Feature: domain Description: PRK09692 Location: 43900-45061 bp Feature: domain Description: PRK09692 Location: 43900-45061 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Psu (pfam07455), RVT-Retrons, PRK09692 (Integrase; provisional)

Seq: QOMJ01000105.1 Escherichia coli strain SC375 NODE_44_length_19490_cov_94.7822_ID_91, whole genome shotgun sequence (19491 bp)
Overview 1 RT 1: 2300-6300 bp Neighborhood of RT #1 [2300, 6308] DcuC RVT-GII Asparaginase_2 Feature: gene Location: 2300-3661 bp Feature: domain Description: DcuC Location: 2303-3635 bp Feature: domain Description: DcuC Location: 2 303-3635 bp Feature: gene Location: 3714-4085 bp Feature: gene Location: 4307-4753 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4613-4715 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4613-4715 bp Feature: gene Location: 4801-4950 bp Feature: gene Location: 5277-6308 bp Feature: domain Description: Asparaginase_2 Location: 5367-6300 bp Feature: domain Description: Asparaginase_2 Location: 5367-6300 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DcuC (TIGR00771), RVT-GII, Asparaginase_2 (pfam01112)