myRT

myRT report for GCA_003358575.1_ASM335857v1

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Seq: QONX01000083.1 Escherichia coli strain SC335 NODE_20_length_71713_cov_117.237_ID_63, whole genome shotgun sequence (71713 bp)
Overview 1 RT 1: 420-6451 bp Neighborhood of RT #1 [420, 6451] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 420-1340 bp Feature: domain Description: AbiEii Location: 462-1203 bp Feature: domain Description: AbiEii Location: 462-1 203 bp Feature: gene Location: 1327-2130 bp Feature: domain Description: AbiEi_3_N Location: 1360-1621 bp Feature: domain Description: AbiEi_3_N Location: 1 360-1 621 bp Feature: domain Description: AbiEi_3 Location: 1633-2089 bp Feature: domain Description: AbiEi_3 Location: 1 633-2089 bp Feature: gene Location: 2425-5634 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2953-3442 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2953-3442 bp Feature: domain Description: nitrilase Location: 4948-5545 bp Feature: domain Description: nitrilase Location: 4948-5545 bp Feature: gene Location: 5795-5935 bp Feature: domain Description: Phage_ASH Location: 5822-5915 bp Feature: domain Description: Phage_ASH Location: 5822-591 5 bp Feature: gene Location: 5981-6451 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)

Seq: QONX01000021.1 Escherichia coli strain SC335 NODE_3_length_454848_cov_117.274_ID_11, whole genome shotgun sequence (454848 bp)
Overview 1 RT 1: 193511-196618 bp Neighborhood of RT #1 [193511, 196623] RVT-Retrons Q Feature: gene Location: 193511-193654 bp Feature: gene Location: 193762-193902 bp Feature: gene Location: 193970-195160 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 194120-194702 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 19412 0-194702 bp Feature: gene Location: 195157-195864 bp Feature: gene Location: 195907-196623 bp Feature: domain Description: Q Location: 195913-196618 bp Feature: domain Description: Q Location: 195913-196618 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Q (PHA02536)