myRT

myRT report for GCA_003358665.1_ASM335866v1

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Seq: QOOD01000163.1 Escherichia marmotae strain SC329 NODE_12_length_136143_cov_505.678_ID_479, whole genome shotgun sequence (136143 bp)
Overview 1 RT 1: 119887-126593 bp Neighborhood of RT #1 [119887, 126598] DinI RVT-Retrons Q P Feature: gene Location: 119887-120120 bp Feature: domain Description: DinI Location: 119929-120115 bp Feature: domain Description: DinI Location: 1 1 9929-1 201 1 5 bp Feature: gene Location: 120296-121354 bp Feature: gene Location: 121826-123688 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 122150-122774 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 221 50-1 22774 bp Feature: gene Location: 123807-124832 bp Feature: domain Description: Q Location: 123813-124827 bp Feature: domain Description: Q Location: 1 2381 3-1 24827 bp Feature: gene Location: 124832-126598 bp Feature: domain Description: P Location: 124859-126593 bp Feature: domain Description: P Location: 1 24859-1 26593 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), RVT-Retrons, Q (PHA02536), P (PHA02535)

Seq: QOOD01000056.1 Escherichia marmotae strain SC329 NODE_3_length_372196_cov_474.29_ID_11, whole genome shotgun sequence (372197 bp)
Overview 1 RT 1: 102883-108433 bp Neighborhood of RT #1 [102883, 108433] ribA aconitase_1 RVT-GII GIIM RVT-GII Feature: gene Location: 102883-103536 bp Feature: domain Description: ribA Location: 102958-103528 bp Feature: domain Description: ribA Location: 102 958-10352 8 bp Feature: gene Location: 103600-106275 bp Feature: domain Description: aconitase_1 Location: 103654-106270 bp Feature: domain Description: aconitase_1 Location: 103654-1062 70 bp Feature: gene Location: 106503-107336 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 106506-106923 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 106506-10692 3 bp Feature: domain Description: GIIM Note: maturase Location: 106971-107190 bp Feature: domain Description: GIIM Note: maturase Location: 106971-107190 bp Feature: gene Location: 107337-107543 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 107346-107538 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 107346-107538 bp Feature: gene Location: 107633-107854 bp Feature: gene Location: 107837-108433 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ribA (TIGR00505), aconitase_1 (TIGR01341), RVT-GII, GIIM (pfam08388)