myRT

myRT report for GCA_003358725.1_ASM335872v1

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Seq: QOOF01000038.1 Escherichia coli strain SC327 NODE_20_length_71717_cov_96.2062_ID_59, whole genome shotgun sequence (71717 bp)
Overview 1 RT 1: 420-6451 bp Neighborhood of RT #1 [420, 6451] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 420-1340 bp Feature: domain Description: AbiEii Location: 462-1203 bp Feature: domain Description: AbiEii Location: 462-1 203 bp Feature: gene Location: 1327-2130 bp Feature: domain Description: AbiEi_3_N Location: 1360-1621 bp Feature: domain Description: AbiEi_3_N Location: 1 360-1 621 bp Feature: domain Description: AbiEi_3 Location: 1633-2089 bp Feature: domain Description: AbiEi_3 Location: 1 633-2089 bp Feature: gene Location: 2425-5634 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2953-3442 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2953-3442 bp Feature: domain Description: nitrilase Location: 4948-5545 bp Feature: domain Description: nitrilase Location: 4948-5545 bp Feature: gene Location: 5795-5935 bp Feature: domain Description: Phage_ASH Location: 5822-5915 bp Feature: domain Description: Phage_ASH Location: 5822-591 5 bp Feature: gene Location: 5981-6451 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)

Seq: QOOF01000063.1 Escherichia coli strain SC327 NODE_3_length_455070_cov_99.9678_ID_11, whole genome shotgun sequence (455070 bp)
Overview 1 RT 1: 258127-263223 bp Neighborhood of RT #1 [258127, 263223] Q RVT-Retrons Feature: gene Location: 258127-258942 bp Feature: domain Description: Q Location: 258148-258937 bp Feature: domain Description: Q Location: 2 58148-2 58937 bp Feature: gene Location: 258985-259692 bp Feature: gene Location: 259689-260879 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 259839-260421 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 59839-2 6042 1 bp Feature: gene Location: 261195-261338 bp Feature: gene Location: 261385-263223 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Q (PHA02536), RVT-Retrons