myRT

myRT report for GCA_003358775.1_ASM335877v1

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Seq: QOOC01000061.1 Escherichia marmotae strain SC330 NODE_3_length_374683_cov_115.549_ID_13, whole genome shotgun sequence (374683 bp)
Overview 1 RT 1: 105369-110919 bp Neighborhood of RT #1 [105369, 110919] ribA aconitase_1 RVT-GII GIIM RVT-GII Feature: gene Location: 105369-106022 bp Feature: domain Description: ribA Location: 105444-106014 bp Feature: domain Description: ribA Location: 1 05444-1 0601 4 bp Feature: gene Location: 106086-108761 bp Feature: domain Description: aconitase_1 Location: 106140-108756 bp Feature: domain Description: aconitase_1 Location: 1 061 40-1 08756 bp Feature: gene Location: 108989-109822 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 108992-109409 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 08992-1 09409 bp Feature: domain Description: GIIM Note: maturase Location: 109457-109676 bp Feature: domain Description: GIIM Note: maturase Location: 1 09457-1 09676 bp Feature: gene Location: 109823-110029 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 109832-110024 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 09832-1 1 0024 bp Feature: gene Location: 110119-110340 bp Feature: gene Location: 110323-110919 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ribA (TIGR00505), aconitase_1 (TIGR01341), RVT-GII, GIIM (pfam08388)

Seq: QOOC01000031.1 Escherichia marmotae strain SC330 NODE_8_length_230241_cov_119.647_ID_11, whole genome shotgun sequence (230241 bp)
Overview 1 RT 1: 119978-126684 bp Neighborhood of RT #1 [119978, 126689] DinI RVT-Retrons Q P Feature: gene Location: 119978-120211 bp Feature: domain Description: DinI Location: 120020-120206 bp Feature: domain Description: DinI Location: 12 002 0-12 02 06 bp Feature: gene Location: 120387-121445 bp Feature: gene Location: 121917-123779 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 122241-122865 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12 2 2 41-12 2 865 bp Feature: gene Location: 123898-124923 bp Feature: domain Description: Q Location: 123904-124918 bp Feature: domain Description: Q Location: 12 3904-12 4918 bp Feature: gene Location: 124923-126689 bp Feature: domain Description: P Location: 124950-126684 bp Feature: domain Description: P Location: 12 4950-12 6684 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), RVT-Retrons, Q (PHA02536), P (PHA02535)