myRT

myRT report for GCA_003363055.1_ASM336305v1

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Seq: QRBM01000030.1 Escherichia coli strain 1-RC-17-04352 04352_S22_R1_001_contig00030, whole genome shotgun sequence (77020 bp)
Overview 1 RT 1: 37895-44226 bp Neighborhood of RT #1 [37895, 44237] RVT-Retrons BaeS PRK10722 Feature: gene Location: 37895-39544 bp Feature: gene Location: 39696-39827 bp Feature: gene Location: 39863-41563 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 40415-41027 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4041 5-41 027 bp Feature: gene Location: 41965-43506 bp Feature: domain Description: BaeS Location: 42544-43492 bp Feature: domain Description: BaeS Location: 42544-43492 bp Feature: gene Location: 43518-44237 bp Feature: domain Description: PRK10722 Location: 43557-44226 bp Feature: domain Description: PRK1 0722 Location: 43557-44226 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, BaeS (COG0642), PRK10722 (two-component system QseEF-associated lipoprotein QseG)

Seq: QRBM01000116.1 Escherichia coli strain 1-RC-17-04352 04352_S22_R1_001_contig00116, whole genome shotgun sequence (4354 bp)
Overview 1 RT 1: 1286-4333 bp Neighborhood of RT #1 [1286, 4350] umuC PRK10276 RVT-GII Feature: gene Location: 1286-2557 bp Feature: domain Description: umuC Location: 1289-2552 bp Feature: domain Description: umuC Location: 12 89-2 552 bp Feature: gene Location: 2557-3255 bp Feature: domain Description: PRK10276 Location: 2833-3241 bp Feature: domain Description: PRK102 76 Location: 2 833-32 41 bp Feature: gene Location: 3385-4350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3790-4333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3790-4333 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII