myRT

myRT report for GCA_003363475.1_ASM336347v1

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Seq: QTKJ01000039.1 Klebsiella pneumoniae strain SL68 contig39, whole genome shotgun sequence (32566 bp)
Overview 1 RT 1: 27669-32111 bp Neighborhood of RT #1 [27669, 32113] umuC PRK10276 RVT-GII InsA DDE_Tnp_IS1 Feature: gene Location: 27669-28940 bp Feature: domain Description: umuC Location: 27672-28932 bp Feature: domain Description: umuC Location: 27672-28932 bp Feature: gene Location: 28940-29623 bp Feature: domain Description: PRK10276 Location: 29243-29606 bp Feature: domain Description: PRK1 0276 Location: 29243-29606 bp Feature: gene Location: 29777-31264 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30182-30872 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 301 82-30872 bp Feature: gene Location: 31416-31691 bp Feature: domain Description: InsA Location: 31419-31683 bp Feature: domain Description: InsA Location: 31 41 9-31 683 bp Feature: gene Location: 31736-32113 bp Feature: domain Description: DDE_Tnp_IS1 Location: 31739-32111 bp Feature: domain Description: DDE_Tnp_IS1 Location: 31 739-321 1 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, InsA (COG3677), DDE_Tnp_IS1 (pfam03400)

Seq: QTKJ01000054.1 Klebsiella pneumoniae strain SL68 contig55, whole genome shotgun sequence (4316 bp)
Overview 1 RT 1: 1632-4181 bp Neighborhood of RT #1 [1632, 4181] CspC RVT-Retrons Feature: gene Location: 1632-1895 bp Feature: gene Location: 2104-2307 bp Feature: domain Description: CspC Location: 2107-2302 bp Feature: domain Description: CspC Location: 2 107-2 302 bp Feature: gene Location: 2312-3451 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2456-3011 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 456-3011 bp Feature: gene Location: 3473-3655 bp Feature: gene Location: 4035-4181 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CspC (COG1278), RVT-Retrons

Seq: QTKJ01000007.1 Klebsiella pneumoniae strain SL68 contig7, whole genome shotgun sequence (235950 bp)
Overview 1 RT 1: 28918-33801 bp Neighborhood of RT #1 [28918, 33803] umuC RVT-UG11 PRK09951 PRK15110 Feature: gene Location: 28918-30183 bp Feature: domain Description: umuC Location: 28921-30181 bp Feature: domain Description: umuC Location: 28921-3 0181 bp Feature: gene Location: 30408-30596 bp Feature: gene Location: 30856-31764 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 31129-31585 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 3 1129-3 1585 bp Feature: gene Location: 31965-32633 bp Feature: domain Description: PRK09951 Location: 31968-32631 bp Feature: domain Description: PRK09951 Location: 3 1968-3 263 1 bp Feature: gene Location: 32838-33803 bp Feature: domain Description: PRK15110 Location: 32841-33801 bp Feature: domain Description: PRK15110 Location: 3 2841-3 3 801 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), RVT-UG11, PRK09951 (hypothetical protein; Provisional), PRK15110 (peptide ABC transporter permease SapB)