myRT

myRT report for GCA_003363495.1_ASM336349v1

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Seq: QTKO01000026.1 Klebsiella pneumoniae strain SL46 contig26, whole genome shotgun sequence (68595 bp)
Overview 1 RT 1: 28918-33801 bp Neighborhood of RT #1 [28918, 33803] umuC RVT-UG11 PRK09951 PRK15110 Feature: gene Location: 28918-30183 bp Feature: domain Description: umuC Location: 28921-30181 bp Feature: domain Description: umuC Location: 28921 -301 81 bp Feature: gene Location: 30339-30596 bp Feature: gene Location: 30856-31764 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 31129-31585 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 31 1 29-31 585 bp Feature: gene Location: 31965-32633 bp Feature: domain Description: PRK09951 Location: 31968-32631 bp Feature: domain Description: PRK09951 Location: 31 968-32631 bp Feature: gene Location: 32838-33803 bp Feature: domain Description: PRK15110 Location: 32841-33801 bp Feature: domain Description: PRK1 51 1 0 Location: 32841 -33801 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), RVT-UG11, PRK09951 (hypothetical protein; Provisional), PRK15110 (peptide ABC transporter permease SapB)

Seq: QTKO01000040.1 Klebsiella pneumoniae strain SL46 contig40, whole genome shotgun sequence (16069 bp)
Overview 1 RT 1: 12008-15124 bp Neighborhood of RT #1 [12008, 15124] PRK10276 RVT-GII Feature: gene Location: 12008-12433 bp Feature: domain Description: PRK10276 Location: 12011-12419 bp Feature: domain Description: PRK102 76 Location: 12 011-12 419 bp Feature: gene Location: 12627-12839 bp Feature: gene Location: 12914-14323 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13241-13931 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 132 41-13931 bp Feature: gene Location: 14557-14787 bp Feature: gene Location: 14846-15124 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: QTKO01000058.1 Klebsiella pneumoniae strain SL46 contig59, whole genome shotgun sequence (4316 bp)
Overview 1 RT 1: 2-2455 bp Neighborhood of RT #1 [2, 2455] CspC RVT-Retrons Feature: gene Location: 2-169 bp Feature: gene Location: 378-581 bp Feature: domain Description: CspC Location: 381-576 bp Feature: domain Description: CspC Location: 3 81-576 bp Feature: gene Location: 586-1725 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 730-1285 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 73 0-1285 bp Feature: gene Location: 1747-1929 bp Feature: gene Location: 2309-2455 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CspC (COG1278), RVT-Retrons