myRT

myRT report for GCA_003363515.1_ASM336351v1

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Seq: QTKQ01000013.1 Klebsiella pneumoniae strain SL35 contig13, whole genome shotgun sequence (164998 bp)
Overview 1 RT 1: 28918-33801 bp Neighborhood of RT #1 [28918, 33803] umuC RVT-UG11 PRK09951 PRK15110 Feature: gene Location: 28918-30183 bp Feature: domain Description: umuC Location: 28921-30181 bp Feature: domain Description: umuC Location: 28921 -301 81 bp Feature: gene Location: 30408-30596 bp Feature: gene Location: 30856-31764 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 31129-31585 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 31 1 29-31 585 bp Feature: gene Location: 31965-32633 bp Feature: domain Description: PRK09951 Location: 31968-32631 bp Feature: domain Description: PRK09951 Location: 31 968-32631 bp Feature: gene Location: 32838-33803 bp Feature: domain Description: PRK15110 Location: 32841-33801 bp Feature: domain Description: PRK1 51 1 0 Location: 32841 -33801 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), RVT-UG11, PRK09951 (hypothetical protein; Provisional), PRK15110 (peptide ABC transporter permease SapB)

Seq: QTKQ01000052.1 Klebsiella pneumoniae strain SL35 contig52, whole genome shotgun sequence (7569 bp)
Overview 1 RT 1: 2728-7170 bp Neighborhood of RT #1 [2728, 7172] umuC PRK10276 RVT-GII InsA DDE_Tnp_IS1 Feature: gene Location: 2728-3999 bp Feature: domain Description: umuC Location: 2731-3991 bp Feature: domain Description: umuC Location: 2 731-3991 bp Feature: gene Location: 3999-4811 bp Feature: domain Description: PRK10276 Location: 4431-4794 bp Feature: domain Description: PRK102 76 Location: 4431-4794 bp Feature: gene Location: 4836-6323 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5241-5931 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 41-5931 bp Feature: gene Location: 6475-6750 bp Feature: domain Description: InsA Location: 6478-6742 bp Feature: domain Description: InsA Location: 6478-6742 bp Feature: gene Location: 6669-7172 bp Feature: domain Description: DDE_Tnp_IS1 Location: 6780-7170 bp Feature: domain Description: DDE_Tnp_IS1 Location: 6780-7170 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, InsA (COG3677), DDE_Tnp_IS1 (pfam03400)

Seq: QTKQ01000058.1 Klebsiella pneumoniae strain SL35 contig59, whole genome shotgun sequence (4260 bp)
Overview 1 RT 1: 3-1681 bp Neighborhood of RT #1 [3, 1681] RVT-Retrons CspC Feature: gene Location: 3-1001 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6-561 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6-561 bp Feature: gene Location: 1006-1209 bp Feature: domain Description: CspC Location: 1009-1204 bp Feature: domain Description: CspC Location: 1009-1204 bp Feature: gene Location: 1418-1681 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, CspC (COG1278)