myRT

myRT report for GCA_003363575.1_ASM336357v1

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Seq: QTKR01000002.1 Klebsiella pneumoniae strain SL34 contig2, whole genome shotgun sequence (347357 bp)
Overview 1 RT 1: 28918-33801 bp Neighborhood of RT #1 [28918, 33803] umuC RVT-UG11 PRK09951 PRK15110 Feature: gene Location: 28918-30183 bp Feature: domain Description: umuC Location: 28921-30181 bp Feature: domain Description: umuC Location: 28921 -301 81 bp Feature: gene Location: 30408-30596 bp Feature: gene Location: 30856-31764 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 31129-31585 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 31 1 29-31 585 bp Feature: gene Location: 31965-32633 bp Feature: domain Description: PRK09951 Location: 31968-32631 bp Feature: domain Description: PRK09951 Location: 31 968-32631 bp Feature: gene Location: 32838-33803 bp Feature: domain Description: PRK15110 Location: 32841-33801 bp Feature: domain Description: PRK1 51 1 0 Location: 32841 -33801 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), RVT-UG11, PRK09951 (hypothetical protein; Provisional), PRK15110 (peptide ABC transporter permease SapB)

Seq: QTKR01000044.1 Klebsiella pneumoniae strain SL34 contig44, whole genome shotgun sequence (14080 bp)
Overview 1 RT 1: 9183-13625 bp Neighborhood of RT #1 [9183, 13627] umuC PRK10276 RVT-GII InsA DDE_Tnp_IS1 Feature: gene Location: 9183-10454 bp Feature: domain Description: umuC Location: 9186-10446 bp Feature: domain Description: umuC Location: 9186-10446 bp Feature: gene Location: 10454-11266 bp Feature: domain Description: PRK10276 Location: 10886-11249 bp Feature: domain Description: PRK102 76 Location: 10886-112 49 bp Feature: gene Location: 11291-12778 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11696-12386 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11696-12 386 bp Feature: gene Location: 12930-13205 bp Feature: domain Description: InsA Location: 12933-13197 bp Feature: domain Description: InsA Location: 12 933-13197 bp Feature: gene Location: 13124-13627 bp Feature: domain Description: DDE_Tnp_IS1 Location: 13235-13625 bp Feature: domain Description: DDE_Tnp_IS1 Location: 132 35-1362 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, InsA (COG3677), DDE_Tnp_IS1 (pfam03400)

Seq: QTKR01000059.1 Klebsiella pneumoniae strain SL34 contig60, whole genome shotgun sequence (4316 bp)
Overview 1 RT 1: 695-2718 bp Neighborhood of RT #1 [695, 2718] RVT-Retrons CspC Feature: gene Location: 695-877 bp Feature: gene Location: 899-2038 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1043-1598 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1043 -1598 bp Feature: gene Location: 2043-2246 bp Feature: domain Description: CspC Location: 2046-2241 bp Feature: domain Description: CspC Location: 2046-2241 bp Feature: gene Location: 2455-2718 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, CspC (COG1278)

Seq: QTKR01000072.1 Klebsiella pneumoniae strain SL34 contig73, whole genome shotgun sequence (1921 bp)
Overview 1 RT 1: 72-1221 bp Neighborhood of RT #1 [72, 1403] RVT-GII GIIM Feature: gene Location: 72-1403 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 348-966 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34 8-966 bp Feature: domain Description: GIIM Note: maturase Location: 1008-1221 bp Feature: domain Description: GIIM Note: maturase Location: 1008-1221 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)