myRT

myRT report for GCA_003363645.1_ASM336364v1

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Seq: QTKP01000027.1 Klebsiella pneumoniae strain SL36 contig27, whole genome shotgun sequence (68595 bp)
Overview 1 RT 1: 28918-33801 bp Neighborhood of RT #1 [28918, 33803] umuC RVT-UG11 PRK09951 PRK15110 Feature: gene Location: 28918-30183 bp Feature: domain Description: umuC Location: 28921-30181 bp Feature: domain Description: umuC Location: 28921 -301 81 bp Feature: gene Location: 30339-30596 bp Feature: gene Location: 30856-31764 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 31129-31585 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 31 1 29-31 585 bp Feature: gene Location: 31965-32633 bp Feature: domain Description: PRK09951 Location: 31968-32631 bp Feature: domain Description: PRK09951 Location: 31 968-32631 bp Feature: gene Location: 32838-33803 bp Feature: domain Description: PRK15110 Location: 32841-33801 bp Feature: domain Description: PRK1 51 1 0 Location: 32841 -33801 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), RVT-UG11, PRK09951 (hypothetical protein; Provisional), PRK15110 (peptide ABC transporter permease SapB)

Seq: QTKP01000052.1 Klebsiella pneumoniae strain SL36 contig52, whole genome shotgun sequence (7857 bp)
Overview 1 RT 1: 3732-7015 bp Neighborhood of RT #1 [3732, 7015] PRK10276 RVT-GII Feature: gene Location: 3732-4157 bp Feature: domain Description: PRK10276 Location: 3735-4143 bp Feature: domain Description: PRK102 76 Location: 3735-4143 bp Feature: gene Location: 4387-4554 bp Feature: gene Location: 4560-6047 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4965-5655 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4965-5655 bp Feature: gene Location: 6281-6511 bp Feature: gene Location: 6845-7015 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: QTKP01000064.1 Klebsiella pneumoniae strain SL36 contig65, whole genome shotgun sequence (4316 bp)
Overview 1 RT 1: 1385-4314 bp Neighborhood of RT #1 [1385, 4314] RVT-Retrons CspC Feature: gene Location: 1385-1762 bp Feature: gene Location: 2396-2578 bp Feature: gene Location: 2600-3739 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2744-3299 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2744-3 299 bp Feature: gene Location: 3744-3947 bp Feature: domain Description: CspC Location: 3747-3942 bp Feature: domain Description: CspC Location: 3 747-3 942 bp Feature: gene Location: 4156-4314 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, CspC (COG1278)