myRT

myRT report for GCA_003367075.1_ASM336707v1

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Seq: PVMC01000080.1 Cylindrospermopsis raciborskii Cr2010 Contig_17, whole genome shotgun sequence (73332 bp)
Overview 1 RT 1: 41545-45109 bp Neighborhood of RT #1 [41545, 45120] HEAT CpeS RVT_N RVT-GII GIIM CpeS cyt_b559_alpha Feature: gene Location: 41545-42219 bp Feature: domain Description: HEAT Location: 41554-42199 bp Feature: domain Description: HEAT Location: 41 554-421 99 bp Feature: gene Location: 42411-42677 bp Feature: domain Description: CpeS Location: 42417-42645 bp Feature: domain Description: CpeS Location: 4241 7-42645 bp Feature: gene Location: 43201-44301 bp Feature: RT Description: RVT_N Location: 43237-43408 bp Feature: RT Description: RVT_N Location: 43237-43408 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43432-43948 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43432-43948 bp Feature: domain Description: GIIM Note: maturase Location: 44008-44209 bp Feature: domain Description: GIIM Note: maturase Location: 44008-44209 bp Feature: gene Location: 44455-44718 bp Feature: domain Description: CpeS Location: 44458-44665 bp Feature: domain Description: CpeS Location: 44458-44665 bp Feature: gene Location: 44872-45120 bp Feature: domain Description: cyt_b559_alpha Location: 44878-45109 bp Feature: domain Description: cyt_b559_alpha Location: 44878-451 09 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HEAT (sd00044), CpeS (pfam09367), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), cyt_b559_alpha (TIGR01332)

Seq: PVMC01000057.1 Cylindrospermopsis raciborskii Cr2010 Contig_2, whole genome shotgun sequence (231247 bp)
Overview 1 RT 1: 6614-11285 bp 2 RT 2: 89602-94736 bp Neighborhood of RT #1 [6614, 11290] N_methyl Pilin_GH KOG0404 RVT_N RVT-GII GIIM KOG0404 TRX_NTR TRX_NTR Neighborhood of RT #2 [89602, 94750] RNR_II_monomer RVT-GII GIIM RTPR DUF3598 Feature: gene Location: 6614-7138 bp Feature: domain Description: N_methyl Location: 6674-6743 bp Feature: domain Description: N_methyl Location: 6674-6743 bp Feature: domain Description: Pilin_GH Location: 6779-7106 bp Feature: domain Description: Pilin_GH Location: 6779-7106 bp Feature: gene Location: 7353-7541 bp Feature: domain Description: KOG0404 Location: 7383-7530 bp Feature: domain Description: KOG0404 Location: 7383-7530 bp Feature: gene Location: 8195-9745 bp Feature: RT Description: RVT_N Location: 8279-8462 bp Feature: RT Description: RVT_N Location: 82 79-8462 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8537-9143 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8537-9143 bp Feature: domain Description: GIIM Note: maturase Location: 9266-9488 bp Feature: domain Description: GIIM Note: maturase Location: 92 66-9488 bp Feature: gene Location: 9811-10965 bp Feature: domain Description: KOG0404 Location: 9814-10546 bp Feature: domain Description: KOG0404 Location: 9814-10546 bp Feature: domain Description: TRX_NTR Location: 10666-10951 bp Feature: domain Description: TRX_NTR Location: 10666-10951 bp Feature: gene Location: 11066-11290 bp Feature: domain Description: TRX_NTR Location: 11069-11285 bp Feature: domain Description: TRX_NTR Location: 11069-112 85 bp Feature: gene Location: 89602-89865 bp Feature: domain Description: RNR_II_monomer Location: 89665-89860 bp Feature: domain Description: RNR_II_monomer Location: 89665-89860 bp Feature: gene Location: 90295-90447 bp Feature: gene Location: 90474-91727 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90651-91269 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90651-912 69 bp Feature: domain Description: GIIM Note: maturase Location: 91350-91584 bp Feature: domain Description: GIIM Note: maturase Location: 91350-91584 bp Feature: gene Location: 91908-93866 bp Feature: domain Description: RTPR Location: 91911-93840 bp Feature: domain Description: RTPR Location: 91911-93840 bp Feature: gene Location: 93896-94750 bp Feature: domain Description: DUF3598 Location: 93905-94736 bp Feature: domain Description: DUF3598 Location: 93905-94736 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TRX_NTR (cd02949), N_methyl (pfam07963), Pilin_GH (pfam16734), KOG0404 (KOG0404, Thioredoxin reductase ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), RNR_II_monomer (cd01676), RTPR (TIGR02505), DUF3598 (pfam12204)

Seq: PVMC01000076.1 Cylindrospermopsis raciborskii Cr2010 Contig_34, whole genome shotgun sequence (27299 bp)
Overview 1 RT 1: 10513-14789 bp Neighborhood of RT #1 [10513, 14851] RVT_N RVT-GII GIIM QueC MviM Feature: gene Location: 10513-10650 bp Feature: gene Location: 10727-10927 bp Feature: gene Location: 11074-12774 bp Feature: RT Description: RVT_N Location: 11101-11314 bp Feature: RT Description: RVT_N Location: 11101-113 14 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11365-12046 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 113 65-12046 bp Feature: domain Description: GIIM Note: maturase Location: 12148-12379 bp Feature: domain Description: GIIM Note: maturase Location: 12148-123 79 bp Feature: gene Location: 12907-13575 bp Feature: domain Description: QueC Location: 12910-13567 bp Feature: domain Description: QueC Location: 12910-13 567 bp Feature: gene Location: 13772-14851 bp Feature: domain Description: MviM Location: 13838-14789 bp Feature: domain Description: MviM Location: 13 83 8-14789 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), QueC (pfam06508), MviM (COG0673)