myRT

myRT report for GCA_003382225.1_ASM338222v1

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Seq: QTKB01000021.1 Klebsiella pneumoniae strain 201 NODE_21_length_91763_cov_53.3573, whole genome shotgun sequence (91763 bp)
Overview 1 RT 1: 12555-19709 bp Neighborhood of RT #1 [12555, 19732] GlgS COG3440 RVT-UG5 TraG_N conj_conj_conj_TIGR03755 Feature: gene Location: 12555-12797 bp Feature: domain Description: GlgS Location: 12600-12795 bp Feature: domain Description: GlgS Location: 1 2600-1 2795 bp Feature: gene Location: 12836-13708 bp Feature: domain Description: COG3440 Location: 12854-13700 bp Feature: domain Description: COG3440 Location: 1 2854-1 3700 bp Feature: gene Location: 13880-16822 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 14381-14840 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1 4381 -1 4840 bp Feature: gene Location: 16887-18374 bp Feature: domain Description: TraG_N Location: 16911-18321 bp Feature: domain Description: TraG_N Location: 1 691 1 -1 8321 bp Feature: gene Location: 18371-19732 bp Feature: domain Description: conj_conj_conj_TIGR03755 Location: 18461-19709 bp Feature: domain Description: conj_conj_conj_TIGR03755 Location: 1 8461 -1 9709 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GlgS (pfam08971), COG3440 (Predicted restriction endonuclease ), RVT-UG5, TraG_N (pfam07916), conj_conj_conj_TIGR03755

Seq: QTKB01000036.1 Klebsiella pneumoniae strain 201 NODE_36_length_29366_cov_75.7311, whole genome shotgun sequence (29366 bp)
Overview 1 RT 1: 4071-7408 bp Neighborhood of RT #1 [4071, 7473] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 4071-4310 bp Feature: gene Location: 4373-4828 bp Feature: domain Description: PHA02517 Location: 4382-4802 bp Feature: domain Description: PHA02 517 Location: 4382 -4802 bp Feature: gene Location: 4924-6447 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5197-5929 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5197-592 9 bp Feature: domain Description: GIIM Note: maturase Location: 6004-6202 bp Feature: domain Description: GIIM Note: maturase Location: 6004-62 02 bp Feature: gene Location: 6401-6826 bp Feature: gene Location: 7039-7473 bp Feature: domain Description: PHA02517 Location: 7141-7408 bp Feature: domain Description: PHA02 517 Location: 7141-7408 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: QTKB01000048.1 Klebsiella pneumoniae strain 201 NODE_48_length_1916_cov_257.345, whole genome shotgun sequence (1916 bp)
Overview 1 RT 1: 60-1913 bp Neighborhood of RT #1 [60, 1913] RVT-GII Feature: gene Location: 60-1547 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 465-1155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 465-1155 bp Feature: gene Location: 1701-1913 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: QTKB01000005.1 Klebsiella pneumoniae strain 201 NODE_5_length_272559_cov_51.2471, whole genome shotgun sequence (272559 bp)
Overview 1 RT 1: 31777-38630 bp Neighborhood of RT #1 [31777, 38647] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 31777-32442 bp Feature: domain Description: INT_P4_C Location: 31882-32440 bp Feature: domain Description: INT_P4 _C Location: 31882-324 4 0 bp Feature: gene Location: 32703-33143 bp Feature: domain Description: Integrase_1 Location: 32709-32925 bp Feature: domain Description: Integrase_1 Location: 32709-32925 bp Feature: gene Location: 33200-35278 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33608-34052 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33608-34 052 bp Feature: gene Location: 35278-37887 bp Feature: domain Description: FimD Location: 35335-37876 bp Feature: domain Description: FimD Location: 35335-37876 bp Feature: gene Location: 37919-38647 bp Feature: domain Description: FimC Location: 37952-38630 bp Feature: domain Description: FimC Location: 37952-38630 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)