myRT

myRT report for GCA_003382345.1_ASM338234v1

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Seq: PQWM01000001.1 Bacillus megaterium strain CHCC20162 CHCC20162_contig_1, whole genome shotgun sequence (2178 bp)
Overview 1 RT 1: 1-2175 bp Neighborhood of RT #1 [1, 2175] RVT-GII GIIM RVT_N RVT-GII Feature: gene Location: 1-1020 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-457 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-457 bp Feature: domain Description: GIIM Note: maturase Location: 526-757 bp Feature: domain Description: GIIM Note: maturase Location: 526-757 bp Feature: gene Location: 1021-1572 bp Feature: RT Description: RVT_N Location: 1069-1315 bp Feature: RT Description: RVT_N Location: 1 069-1 31 5 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1369-1567 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 369-1 567 bp Feature: gene Location: 2017-2175 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: PQWM01000002.1 Bacillus megaterium strain CHCC20162 CHCC20162_contig_2, whole genome shotgun sequence (18823 bp)
Overview 1 RT 1: 9022-13885 bp Neighborhood of RT #1 [9022, 13947] PG_binding_1 SinI RVT-GII GIIM HTH_MARR Feature: gene Location: 9022-9552 bp Feature: domain Description: PG_binding_1 Location: 9193-9349 bp Feature: domain Description: PG_binding_1 Location: 9193-9349 bp Feature: gene Location: 9611-9745 bp Feature: domain Description: SinI Location: 9638-9713 bp Feature: domain Description: SinI Location: 9638-9713 bp Feature: gene Location: 10171-11268 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10177-10627 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10177-1062 7 bp Feature: domain Description: GIIM Note: maturase Location: 10693-10927 bp Feature: domain Description: GIIM Note: maturase Location: 10693-1092 7 bp Feature: gene Location: 12326-13159 bp Feature: gene Location: 13501-13947 bp Feature: domain Description: HTH_MARR Location: 13594-13885 bp Feature: domain Description: HTH_MARR Location: 13594-13885 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HTH_MARR (smart00347), SinI (pfam08671)

Seq: PQWM01000003.1 Bacillus megaterium strain CHCC20162 CHCC20162_contig_3, whole genome shotgun sequence (5251 bp)
Overview 1 RT 1: 2366-5202 bp Neighborhood of RT #1 [2366, 5202] RVT_N RVT-GII GIIM Feature: gene Location: 2366-2503 bp Feature: gene Location: 2519-2668 bp Feature: gene Location: 2705-4354 bp Feature: RT Description: RVT_N Location: 2753-2999 bp Feature: RT Description: RVT_N Location: 2753 -2999 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3053-3713 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 053 -3 713 bp Feature: domain Description: GIIM Note: maturase Location: 3782-4013 bp Feature: domain Description: GIIM Note: maturase Location: 3 782-4013 bp Feature: gene Location: 4960-5202 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: PQWM01000004.1 Bacillus megaterium strain CHCC20162 CHCC20162_contig_4, whole genome shotgun sequence (54997 bp)
Overview 1 RT 1: 11772-17136 bp Neighborhood of RT #1 [11772, 17228] RVT_N RVT-GII GIIM LysR Feature: gene Location: 11772-12554 bp Feature: gene Location: 12691-12885 bp Feature: gene Location: 13294-14967 bp Feature: RT Description: RVT_N Location: 13378-13624 bp Feature: RT Description: RVT_N Location: 13378-13624 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13678-14326 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13678-14 326 bp Feature: domain Description: GIIM Note: maturase Location: 14392-14626 bp Feature: domain Description: GIIM Note: maturase Location: 14 392-14 626 bp Feature: gene Location: 15629-15787 bp Feature: gene Location: 16332-17228 bp Feature: domain Description: LysR Location: 16335-17136 bp Feature: domain Description: LysR Location: 16335-17136 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), LysR (COG0583)

Seq: PQWM01000050.1 Bacillus megaterium strain CHCC20162 CHCC20162_contig_51, whole genome shotgun sequence (2606 bp)
Overview 1 RT 1: 678-2605 bp Neighborhood of RT #1 [678, 2605] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 678-2471 bp Feature: RT Description: RVT_N Location: 738-978 bp Feature: RT Description: RVT_N Location: 738-978 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1035-1698 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1035 -1698 bp Feature: domain Description: GIIM Note: maturase Location: 1779-2007 bp Feature: domain Description: GIIM Note: maturase Location: 1779-2007 bp Feature: domain Description: HNHc Note: nucleases Location: 2208-2370 bp Feature: domain Description: HNHc Note: nucleases Location: 2208-2370 bp Feature: gene Location: 2474-2605 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: PQWM01000057.1 Bacillus megaterium strain CHCC20162 CHCC20162_contig_58, whole genome shotgun sequence (15725 bp)
Overview 1 RT 1: 3013-7312 bp Neighborhood of RT #1 [3013, 7312] MobL RVT-GII HNHc MobL Feature: gene Location: 3013-3147 bp Feature: gene Location: 3263-3922 bp Feature: domain Description: MobL Location: 3314-3845 bp Feature: domain Description: MobL Location: 3314-3845 bp Feature: gene Location: 3975-5780 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4269-4968 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 426 9-496 8 bp Feature: domain Description: HNHc Note: nucleases Location: 5523-5667 bp Feature: domain Description: HNHc Note: nucleases Location: 5523-56 6 7 bp Feature: gene Location: 6594-6962 bp Feature: domain Description: MobL Location: 6615-6858 bp Feature: domain Description: MobL Location: 6 6 15-6 858 bp Feature: gene Location: 6959-7312 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MobL (pfam18555), RVT-GII, HNHc (smart00507)