myRT

myRT report for GCA_003384035.1_ASM338403v1

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Seq: QQAK01000010.1 Sporosarcina sp. BI001-red NODE_2_length_507035_cov_115.066876, whole genome shotgun sequence (507035 bp)
Overview 1 RT 1: 499556-505063 bp Neighborhood of RT #1 [499556, 505063] PRK12804 PRK12804 SLATT_5 RVT-AbiA LAGLIDADG_2 Feature: gene Location: 499556-500644 bp Feature: domain Description: PRK12804 Location: 499559-500039 bp Feature: domain Description: PRK1 2804 Location: 499559-500039 bp Feature: domain Description: PRK12804 Location: 500264-500627 bp Feature: domain Description: PRK1 2804 Location: 500264-500627 bp Feature: gene Location: 501544-502215 bp Feature: domain Description: SLATT_5 Location: 501580-502207 bp Feature: domain Description: SLATT_5 Location: 501 580-502207 bp Feature: gene Location: 502235-503665 bp Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 502631-503084 bp Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 502631 -503084 bp Feature: gene Location: 503821-504744 bp Feature: domain Description: LAGLIDADG_2 Location: 503848-504325 bp Feature: domain Description: LAGLIDADG_2 Location: 503848-504325 bp Feature: gene Location: 504830-505063 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK12804 (flagellin; Provisional), SLATT_5 (pfam18160), RVT-AbiA, LAGLIDADG_2 (pfam03161)

Seq: QQAK01000012.1 Sporosarcina sp. BI001-red NODE_4_length_423690_cov_85.156036, whole genome shotgun sequence (423690 bp)
Overview 1 RT 1: 295984-300157 bp Neighborhood of RT #1 [295984, 300157] DUF5412 RVT-GII HNHc Feature: gene Location: 295984-296376 bp Feature: domain Description: DUF5412 Location: 296020-296371 bp Feature: domain Description: DUF5412 Location: 2 9602 0-2 96371 bp Feature: gene Location: 296548-296970 bp Feature: gene Location: 297269-299044 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 297527-298223 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 9752 7-2 982 2 3 bp Feature: domain Description: HNHc Note: nucleases Location: 298802-298934 bp Feature: domain Description: HNHc Note: nucleases Location: 2 98802 -2 98934 bp Feature: gene Location: 299225-299389 bp Feature: gene Location: 299618-300157 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5412 (pfam17428), RVT-GII, HNHc (smart00507)