myRT

myRT report for GCA_003384795.1_ASM338479v1

Download annotations/find similar RTs

Seq: QTTG01000001.1 Streptomyces sp. 75 Ga0181096_11, whole genome shotgun sequence (8934660 bp)
Overview 1 RT 1: 8549140-8553241 bp 2 RT 2: 8714529-8722441 bp Neighborhood of RT #1 [8549140, 8553241] PRK06523 HxlR RVT-GII GIIM Neighborhood of RT #2 [8714529, 8722485] EstA RVT-GII GIIM TPR_12 TPR_12 PRK12571 Feature: gene Location: 8549140-8549925 bp Feature: domain Description: PRK06523 Location: 8549158-8549923 bp Feature: domain Description: PRK06523 Location: 85491 58-8549923 bp Feature: gene Location: 8550026-8550544 bp Feature: domain Description: HxlR Location: 8550059-8550368 bp Feature: domain Description: HxlR Location: 8550059-8550368 bp Feature: gene Location: 8551244-8552485 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8551460-8552120 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8551 460-85521 20 bp Feature: domain Description: GIIM Note: maturase Location: 8552201-8552420 bp Feature: domain Description: GIIM Note: maturase Location: 8552201 -8552420 bp Feature: gene Location: 8552519-8552962 bp Feature: gene Location: 8553002-8553241 bp Feature: gene Location: 8714529-8714876 bp Feature: gene Location: 8715541-8716548 bp Feature: domain Description: EstA Location: 8715604-8716357 bp Feature: domain Description: EstA Location: 871 5604-871 6357 bp Feature: gene Location: 8717612-8719003 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8717879-8718572 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 871 7879-871 8572 bp Feature: domain Description: GIIM Note: maturase Location: 8718644-8718863 bp Feature: domain Description: GIIM Note: maturase Location: 871 8644-871 8863 bp Feature: gene Location: 8719657-8720997 bp Feature: domain Description: TPR_12 Location: 8720284-8720473 bp Feature: domain Description: TPR_1 2 Location: 8720284-8720473 bp Feature: domain Description: TPR_12 Location: 8720665-8720839 bp Feature: domain Description: TPR_1 2 Location: 8720665-8720839 bp Feature: gene Location: 8721913-8722485 bp Feature: domain Description: PRK12571 Location: 8721967-8722441 bp Feature: domain Description: PRK1 2571 Location: 8721 967-8722441 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06523 (short chain dehydrogenase; Provisional), HxlR (pfam01638), RVT-GII, GIIM (pfam08388), EstA (COG1075), TPR_12 (pfam13424), PRK12571 (1-deoxy-D-xylulose-5-phosphate synthase; Provisional)

Seq: QTTG01000004.1 Streptomyces sp. 75 Ga0181096_14, whole genome shotgun sequence (57969 bp)
Overview 1 RT 1: 48232-53671 bp Neighborhood of RT #1 [48232, 53862] COG3464 COG3464 RVT-GII GIIM EstA Feature: gene Location: 48232-48387 bp Feature: gene Location: 48631-50205 bp Feature: domain Description: COG3464 Location: 48691-49336 bp Feature: domain Description: COG3464 Location: 48691-49336 bp Feature: domain Description: COG3464 Location: 49825-50176 bp Feature: domain Description: COG3464 Location: 4982 5-50176 bp Feature: gene Location: 50404-51795 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50671-51364 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50671-51364 bp Feature: domain Description: GIIM Note: maturase Location: 51436-51655 bp Feature: domain Description: GIIM Note: maturase Location: 51436-51655 bp Feature: gene Location: 53036-53197 bp Feature: gene Location: 53296-53862 bp Feature: domain Description: EstA Location: 53305-53671 bp Feature: domain Description: EstA Location: 53305-53671 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3464 (Transposase ), RVT-GII, GIIM (pfam08388), EstA (COG1075)

Seq: QTTG01000005.1 Streptomyces sp. 75 Ga0181096_15, whole genome shotgun sequence (49960 bp)
Overview 1 RT 1: 35955-44957 bp Neighborhood of RT #1 [35955, 44957] RVT-GII GIIM Hit FCS Rad50_zn_hook Rad50_zn_hook PRK09183 COG4584 RVT-GII GIIM COG3464 COG3464 Feature: gene Location: 35955-36152 bp Feature: gene Location: 36149-36346 bp Feature: gene Location: 36530-37078 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36536-36701 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 653 6-3 6701 bp Feature: domain Description: GIIM Note: maturase Location: 36782-37013 bp Feature: domain Description: GIIM Note: maturase Location: 3 6782-3 7013 bp Feature: gene Location: 36864-37454 bp Feature: domain Description: Hit Location: 37104-37377 bp Feature: domain Description: Hit Location: 3 7104-3 73 77 bp Feature: gene Location: 37515-38165 bp Feature: domain Description: FCS Location: 37569-37650 bp Feature: domain Description: FCS Location: 3 7569-3 7650 bp Feature: domain Description: Rad50_zn_hook Location: 37680-37734 bp Feature: domain Description: Rad50_zn_hook Location: 3 7680-3 773 4 bp Feature: domain Description: Rad50_zn_hook Location: 37782-37827 bp Feature: domain Description: Rad50_zn_hook Location: 3 7782-3 7827 bp Feature: gene Location: 38155-38964 bp Feature: domain Description: PRK09183 Location: 38200-38920 bp Feature: domain Description: PRK09183 Location: 3 8200-3 8920 bp Feature: gene Location: 38961-40322 bp Feature: domain Description: COG4584 Location: 38964-39681 bp Feature: domain Description: COG4584 Location: 3 8964-3 9681 bp Feature: gene Location: 41394-42785 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41661-42354 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41661-423 54 bp Feature: domain Description: GIIM Note: maturase Location: 42426-42645 bp Feature: domain Description: GIIM Note: maturase Location: 42426-42645 bp Feature: gene Location: 42984-44558 bp Feature: domain Description: COG3464 Location: 43044-43689 bp Feature: domain Description: COG3 464 Location: 43 044-43 689 bp Feature: domain Description: COG3464 Location: 44178-44529 bp Feature: domain Description: COG3 464 Location: 44178-44529 bp Feature: gene Location: 44802-44957 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Hit (COG0537), FCS (LOAD_FCS), Rad50_zn_hook (pfam04423), PRK09183 (transposase/IS protein; Provisional), COG4584 (Transposase ), COG3464 (Transposase )