myRT

myRT report for GCA_003384865.1_ASM338486v1

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Seq: QTTM01000001.1 Streptomyces sp. 3212.3 Ga0151166_11, whole genome shotgun sequence (9891705 bp)
Overview 1 RT 1: 3099948-3105296 bp 2 RT 2: 7119981-7128835 bp Neighborhood of RT #1 [3099948, 3105436] PASTA PASTA RVT_N RVT-GII RVT-GII GIIM HNH Transposase_mut Neighborhood of RT #2 [7119981, 7128870] HTH_Tnp_4 DDE_5 RVT-GII GIIM HTH_XRE UdpNAET Feature: gene Location: 3099948-3100577 bp Feature: domain Description: PASTA Location: 3099999-3100287 bp Feature: domain Description: PASTA Location: 3099999-31 00287 bp Feature: domain Description: PASTA Location: 3100365-3100545 bp Feature: domain Description: PASTA Location: 31 00365-31 00545 bp Feature: gene Location: 3101539-3101739 bp Feature: gene Location: 3102549-3103196 bp Feature: RT Description: RVT_N Location: 3102612-3102855 bp Feature: RT Description: RVT_N Location: 31 0261 2-31 02855 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3102906-3103179 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 02906-31 031 79 bp Feature: gene Location: 3103230-3103904 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3103233-3103545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 03233-31 03545 bp Feature: domain Description: GIIM Note: maturase Location: 3103599-3103830 bp Feature: domain Description: GIIM Note: maturase Location: 31 03599-31 03830 bp Feature: gene Location: 3104007-3104315 bp Feature: domain Description: HNH Note: nucleases Location: 3104145-3104253 bp Feature: domain Description: HNH Note: nucleases Location: 31 041 45-31 04253 bp Feature: gene Location: 3104456-3105436 bp Feature: domain Description: Transposase_mut Location: 3104468-3105296 bp Feature: domain Description: Transposase_mut Location: 31 04468-31 05296 bp Feature: gene Location: 7119981-7121252 bp Feature: domain Description: HTH_Tnp_4 Location: 7120056-7120209 bp Feature: domain Description: HTH_Tnp_4 Location: 71 20056-71 20209 bp Feature: gene Location: 7122276-7123799 bp Feature: domain Description: DDE_5 Location: 7122342-7123131 bp Feature: domain Description: DDE_5 Location: 71 22342-71 231 31 bp Feature: gene Location: 7124826-7126190 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7125165-7125804 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71 251 65-71 25804 bp Feature: domain Description: GIIM Note: maturase Location: 7125885-7126107 bp Feature: domain Description: GIIM Note: maturase Location: 71 25885-71 261 07 bp Feature: gene Location: 7126915-7127337 bp Feature: gene Location: 7127341-7128870 bp Feature: domain Description: HTH_XRE Location: 7127371-7127542 bp Feature: domain Description: HTH_XRE Location: 71 27371 -71 27542 bp Feature: domain Description: UdpNAET Location: 7127590-7128835 bp Feature: domain Description: UdpNAET Location: 71 27590-71 28835 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PASTA (smart00740), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), Transposase_mut (pfam00872), HTH_Tnp_4 (pfam13613), DDE_5 (pfam13546), HTH_XRE (smart00530), UdpNAET (cd01555)