myRT

myRT report for GCA_003384905.1_ASM338490v1

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Seq: QTTO01000002.1 Pantoea ananatis strain PNA 07-10 Ga0215829_102, whole genome shotgun sequence (809435 bp)
Overview 1 RT 1: 522669-526664 bp Neighborhood of RT #1 [522669, 526666] RVT-UG4 PRK15287 PRK15287 Feature: gene Location: 522669-523004 bp Feature: gene Location: 523720-524580 bp Feature: gene Location: 524577-525566 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 524916-525363 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 52491 6-525363 bp Feature: gene Location: 525563-526084 bp Feature: domain Description: PRK15287 Location: 525635-526079 bp Feature: domain Description: PRK1 5287 Location: 525635-526079 bp Feature: gene Location: 526151-526666 bp Feature: domain Description: PRK15287 Location: 526238-526664 bp Feature: domain Description: PRK1 5287 Location: 526238-526664 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, PRK15287 (fimbrial minor subunit StfF)

Seq: QTTO01000007.1 Pantoea ananatis strain PNA 07-10 Ga0215829_107, whole genome shotgun sequence (234111 bp)
Overview 1 RT 1: 111815-115169 bp Neighborhood of RT #1 [111815, 115169] IncFII_repA RVT-GII GIIM HNHc Feature: gene Location: 111815-111958 bp Feature: gene Location: 112044-113252 bp Feature: domain Description: IncFII_repA Location: 112734-113091 bp Feature: domain Description: IncFII_repA Location: 112 734-113091 bp Feature: gene Location: 112722-114377 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 113004-113655 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 113004-113655 bp Feature: domain Description: GIIM Note: maturase Location: 113709-113940 bp Feature: domain Description: GIIM Note: maturase Location: 113709-113940 bp Feature: domain Description: HNHc Note: nucleases Location: 114174-114330 bp Feature: domain Description: HNHc Note: nucleases Location: 114174-114330 bp Feature: gene Location: 114451-114597 bp Feature: gene Location: 114786-115169 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IncFII_repA (pfam02387), RVT-GII, GIIM (pfam08388), HNHc (smart00507)