myRT

myRT report for GCA_003384975.1_ASM338497v1

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Seq: QTZT01000036.1 Klebsiella variicola strain BD_DM_166 NODE_36_length_26237_cov_19.9678_pilon, whole genome shotgun sequence (26237 bp)
Overview 1 RT 1: 15039-22662 bp Neighborhood of RT #1 [15039, 22694] HsdS RMtype1_S_Eco2747I-TRD2-CR2_like RMtype1_S_Eco2747I-TRD2-CR2_like PRK04247 RVT-UG5 IncA Peptidase_M78 Feature: gene Location: 15039-16715 bp Feature: domain Description: HsdS Location: 15045-15378 bp Feature: domain Description: HsdS Location: 1 5045-1 5378 bp Feature: domain Description: RMtype1_S_Eco2747I-TRD2-CR2_like Location: 15612-15831 bp Feature: domain Description: RMtype1 _S_Eco2747I-TRD2-CR2_like Location: 1 561 2-1 5831 bp Feature: domain Description: RMtype1_S_Eco2747I-TRD2-CR2_like Location: 16131-16692 bp Feature: domain Description: RMtype1 _S_Eco2747I-TRD2-CR2_like Location: 1 61 31 -1 6692 bp Feature: gene Location: 16726-17826 bp Feature: domain Description: PRK04247 Location: 16789-17017 bp Feature: domain Description: PRK04247 Location: 1 6789-1 701 7 bp Feature: gene Location: 18006-21023 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 18504-18999 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1 8504-1 8999 bp Feature: gene Location: 21442-22146 bp Feature: domain Description: IncA Location: 21763-22105 bp Feature: domain Description: IncA Location: 21 763-221 05 bp Feature: gene Location: 22146-22694 bp Feature: domain Description: Peptidase_M78 Location: 22299-22662 bp Feature: domain Description: Peptidase_M78 Location: 22299-22662 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdS (COG0732), RMtype1_S_Eco2747I-TRD2-CR2_like (cd17247), PRK04247 (endonuclease NucS), RVT-UG5, IncA, Peptidase_M78 (pfam06114)

Seq: QTZT01000038.1 Klebsiella variicola strain BD_DM_166 NODE_38_length_23443_cov_15.3721_pilon, whole genome shotgun sequence (23443 bp)
Overview 1 RT 1: 19168-23377 bp Neighborhood of RT #1 [19168, 23442] DUF4756 RVT-Retrons HTH_23 Feature: gene Location: 19168-19647 bp Feature: domain Description: DUF4756 Location: 19171-19642 bp Feature: domain Description: DUF4756 Location: 19171-19642 bp Feature: gene Location: 19882-20760 bp Feature: gene Location: 21047-21988 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21215-21764 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 12 15-2 1764 bp Feature: gene Location: 22079-22954 bp Feature: gene Location: 23158-23442 bp Feature: domain Description: HTH_23 Location: 23239-23377 bp Feature: domain Description: HTH_2 3 Location: 2 32 39-2 3377 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4756 (pfam15948), RVT-Retrons, HTH_23 (pfam13384)

Seq: QTZT01000091.1 Klebsiella variicola strain BD_DM_166 NODE_91_length_1787_cov_50.9331_pilon, whole genome shotgun sequence (1787 bp)
Overview 1 RT 1: 2-1784 bp Neighborhood of RT #1 [2, 1784] RVT-GII Feature: gene Location: 2-145 bp Feature: gene Location: 172-1398 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 427-1117 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 427-1117 bp Feature: gene Location: 1545-1784 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII