myRT

myRT report for GCA_003386275.1_ASM338627v1

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Seq: QREI01000002.1 Winogradskyella pacifica strain CECT 7948 Ga0244604_102, whole genome shotgun sequence (678566 bp)
Overview 1 RT 1: 673878-678338 bp Neighborhood of RT #1 [673878, 678338] PRK12378 integrase_gron integrase_gron group_II_RT_mat RVT-UG19 RT_Bac_retron_I Feature: gene Location: 673878-674624 bp Feature: domain Description: PRK12378 Location: 673881-674610 bp Feature: domain Description: PRK1 2378 Location: 673881 -67461 0 bp Feature: gene Location: 674780-675985 bp Feature: domain Description: integrase_gron Location: 675113-675635 bp Feature: domain Description: integrase_gron Location: 6751 1 3-675635 bp Feature: domain Description: integrase_gron Location: 675692-675914 bp Feature: domain Description: integrase_gron Location: 675692-67591 4 bp Feature: gene Location: 676048-677700 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 676087-676342 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 676087-676342 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 676447-676924 bp Feature: RT Description: RVT-UG1 9 Note: UG1 9 RT Location: 676447-676924 bp Feature: domain Description: RT_Bac_retron_I Location: 677374-677515 bp Feature: domain Description: RT_Bac_retron_I Location: 677374-67751 5 bp Feature: gene Location: 677736-678338 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK12378 (YebC/PmpR family DNA-binding transcriptional regulator), integrase_gron (TIGR02249), group_II_RT_mat (TIGR04416), RVT-UG19, RT_Bac_retron_I (cd01646)

Seq: QREI01000003.1 Winogradskyella pacifica strain CECT 7948 Ga0244604_103, whole genome shotgun sequence (557238 bp)
Overview 1 RT 1: 371441-377085 bp Neighborhood of RT #1 [371441, 378065] RMtype1_S_Cbo7060ORF11580P_TRD2-CR2_like RMtype1_S_Cbo7060ORF11580P_TRD2-CR2_like RVT-Retrons KAP_NTPase Feature: gene Location: 371441-372904 bp Feature: domain Description: RMtype1_S_Cbo7060ORF11580P_TRD2-CR2_like Location: 371576-371993 bp Feature: domain Description: RMtype1_S_Cbo7060ORF11580P_TRD2 -CR2 _like Location: 371576-371993 bp Feature: domain Description: RMtype1_S_Cbo7060ORF11580P_TRD2-CR2_like Location: 372203-372746 bp Feature: domain Description: RMtype1_S_Cbo7060ORF11580P_TRD2 -CR2 _like Location: 372 2 03-372 746 bp Feature: gene Location: 372918-374198 bp Feature: gene Location: 374416-375555 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 374671-375298 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 374671-3752 98 bp Feature: gene Location: 375816-376115 bp Feature: gene Location: 376119-378065 bp Feature: domain Description: KAP_NTPase Location: 376215-377085 bp Feature: domain Description: KAP_NTPase Location: 3762 15-377085 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RMtype1_S_Cbo7060ORF11580P_TRD2-CR2_like (cd17284), RVT-Retrons, KAP_NTPase (pfam07693)