myRT

myRT report for GCA_003386915.1_ASM338691v1

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Seq: QTZQ01000197.1 Klebsiella variicola strain BD_DM_33 NODE_197_length_741_cov_1.92508_pilon, whole genome shotgun sequence (741 bp)
Overview 1 RT 1: 341-737 bp Neighborhood of RT #1 [341, 739] RVT-Retrons Feature: gene Location: 341-739 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 509-737 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 509-737 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: QTZQ01000042.1 Klebsiella variicola strain BD_DM_33 NODE_42_length_41567_cov_15.5348_pilon, whole genome shotgun sequence (41567 bp)
Overview 1 RT 1: 224-6185 bp Neighborhood of RT #1 [224, 6208] RVT-UG5 PRK04247 HsdS RMtype1_S_Eco2747I-TRD2-CR2_like RMtype1_S_Eco2747I-TRD2-CR2_like Feature: gene Location: 224-3241 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 722-1217 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 72 2 -12 17 bp Feature: gene Location: 3421-4521 bp Feature: domain Description: PRK04247 Location: 3484-3712 bp Feature: domain Description: PRK042 47 Location: 3484-3712 bp Feature: gene Location: 4532-6208 bp Feature: domain Description: HsdS Location: 4538-4871 bp Feature: domain Description: HsdS Location: 4538-4871 bp Feature: domain Description: RMtype1_S_Eco2747I-TRD2-CR2_like Location: 5105-5324 bp Feature: domain Description: RMtype1_S_Eco2 747I-TRD2 -CR2 _like Location: 5105-532 4 bp Feature: domain Description: RMtype1_S_Eco2747I-TRD2-CR2_like Location: 5624-6185 bp Feature: domain Description: RMtype1_S_Eco2 747I-TRD2 -CR2 _like Location: 562 4-6185 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5, PRK04247 (endonuclease NucS), HsdS (COG0732), RMtype1_S_Eco2747I-TRD2-CR2_like (cd17247)

Seq: QTZQ01000078.1 Klebsiella variicola strain BD_DM_33 NODE_78_length_15329_cov_6.78878_pilon, whole genome shotgun sequence (15329 bp)
Overview 1 RT 1: 5055-8903 bp Neighborhood of RT #1 [5055, 8903] HHA RVT-GII INT_Cre_C Feature: gene Location: 5055-5306 bp Feature: domain Description: HHA Location: 5103-5286 bp Feature: domain Description: HHA Location: 5103 -5286 bp Feature: gene Location: 5601-5813 bp Feature: gene Location: 5888-7177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6215-6746 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6215-6746 bp Feature: gene Location: 7384-8520 bp Feature: domain Description: INT_Cre_C Location: 7807-8461 bp Feature: domain Description: INT_Cre_C Location: 7807-8461 bp Feature: gene Location: 8586-8903 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HHA (pfam05321), RVT-GII, INT_Cre_C (cd00799)