myRT

myRT report for GCA_003386995.1_ASM338699v1

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Seq: QTZV01000029.1 Klebsiella variicola strain BD_DM_169 NODE_29_length_55182_cov_7.91062_pilon, whole genome shotgun sequence (55182 bp)
Overview 1 RT 1: 13933-17780 bp Neighborhood of RT #1 [13933, 17780] HHA RVT-GII INT_Cre_C Feature: gene Location: 13933-14187 bp Feature: domain Description: HHA Location: 13984-14167 bp Feature: domain Description: HHA Location: 1 3984-1 41 67 bp Feature: gene Location: 14479-14691 bp Feature: gene Location: 14766-16175 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15093-15783 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5093-1 5783 bp Feature: gene Location: 16261-17397 bp Feature: domain Description: INT_Cre_C Location: 16684-17338 bp Feature: domain Description: INT_Cre_C Location: 1 6684-1 7338 bp Feature: gene Location: 17463-17780 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HHA (pfam05321), RVT-GII, INT_Cre_C (cd00799)

Seq: QTZV01000036.1 Klebsiella variicola strain BD_DM_169 NODE_36_length_26261_cov_20.1565_pilon, whole genome shotgun sequence (26261 bp)
Overview 1 RT 1: 15039-22662 bp Neighborhood of RT #1 [15039, 22694] HsdS RMtype1_S_Eco2747I-TRD2-CR2_like RMtype1_S_Eco2747I-TRD2-CR2_like PRK04247 RVT-UG5 IncA Peptidase_M78 Feature: gene Location: 15039-16715 bp Feature: domain Description: HsdS Location: 15045-15378 bp Feature: domain Description: HsdS Location: 15045-15378 bp Feature: domain Description: RMtype1_S_Eco2747I-TRD2-CR2_like Location: 15612-15831 bp Feature: domain Description: RMtype1_S_Eco2 747I-TRD2 -CR2 _like Location: 15612 -15831 bp Feature: domain Description: RMtype1_S_Eco2747I-TRD2-CR2_like Location: 16131-16692 bp Feature: domain Description: RMtype1_S_Eco2 747I-TRD2 -CR2 _like Location: 16131-16692 bp Feature: gene Location: 16726-17826 bp Feature: domain Description: PRK04247 Location: 16789-17017 bp Feature: domain Description: PRK042 47 Location: 16789-17017 bp Feature: gene Location: 18006-21023 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 18504-18999 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 18504-18999 bp Feature: gene Location: 21442-22146 bp Feature: domain Description: IncA Location: 21763-22105 bp Feature: domain Description: IncA Location: 2 1763-2 2 105 bp Feature: gene Location: 22146-22694 bp Feature: domain Description: Peptidase_M78 Location: 22299-22662 bp Feature: domain Description: Peptidase_M78 Location: 2 2 2 99-2 2 662 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdS (COG0732), RMtype1_S_Eco2747I-TRD2-CR2_like (cd17247), PRK04247 (endonuclease NucS), RVT-UG5, IncA, Peptidase_M78 (pfam06114)

Seq: QTZV01000065.1 Klebsiella variicola strain BD_DM_169 NODE_65_length_4232_cov_17.8741_pilon, whole genome shotgun sequence (4232 bp)
Overview 1 RT 1: 3-4230 bp Neighborhood of RT #1 [3, 4229] DUF4756 RVT-Retrons HTH_23 Feature: gene Location: 3-509 bp Feature: domain Description: DUF4756 Location: 33-504 bp Feature: domain Description: DUF4756 Location: 3 3 -504 bp Feature: gene Location: 744-1622 bp Feature: gene Location: 1909-2850 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2077-2626 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2077-2626 bp Feature: gene Location: 2941-3816 bp Feature: gene Location: 4020-4229 bp Feature: domain Description: HTH_23 Location: 4101-4230 bp Feature: domain Description: HTH_23 Location: 4101-423 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4756 (pfam15948), RVT-Retrons, HTH_23 (pfam13384)