myRT

myRT report for GCA_003387005.1_ASM338700v1

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Seq: QTZZ01000050.1 Klebsiella variicola strain BD_DM_405b NODE_50_length_21250_cov_14.6257_pilon, whole genome shotgun sequence (21250 bp)
Overview 1 RT 1: 15039-18999 bp Neighborhood of RT #1 [15039, 21023] HsdS RMtype1_S_Eco2747I-TRD2-CR2_like RMtype1_S_Eco2747I-TRD2-CR2_like PRK04247 RVT-UG5 Feature: gene Location: 15039-16715 bp Feature: domain Description: HsdS Location: 15045-15378 bp Feature: domain Description: HsdS Location: 1 5045-1 5378 bp Feature: domain Description: RMtype1_S_Eco2747I-TRD2-CR2_like Location: 15612-15831 bp Feature: domain Description: RMtype1 _S_Eco2747I-TRD2-CR2_like Location: 1 561 2-1 5831 bp Feature: domain Description: RMtype1_S_Eco2747I-TRD2-CR2_like Location: 16131-16692 bp Feature: domain Description: RMtype1 _S_Eco2747I-TRD2-CR2_like Location: 1 61 31 -1 6692 bp Feature: gene Location: 16726-17826 bp Feature: domain Description: PRK04247 Location: 16789-17017 bp Feature: domain Description: PRK04247 Location: 1 6789-1 701 7 bp Feature: gene Location: 18006-21023 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 18504-18999 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1 8504-1 8999 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdS (COG0732), RMtype1_S_Eco2747I-TRD2-CR2_like (cd17247), PRK04247 (endonuclease NucS), RVT-UG5

Seq: QTZZ01000064.1 Klebsiella variicola strain BD_DM_405b NODE_64_length_9548_cov_6.61798_pilon, whole genome shotgun sequence (9548 bp)
Overview 1 RT 1: 6927-9523 bp Neighborhood of RT #1 [6927, 9546] DUF4756 RVT-Retrons Feature: gene Location: 6927-7406 bp Feature: domain Description: DUF4756 Location: 6930-7401 bp Feature: domain Description: DUF4756 Location: 6930-7401 bp Feature: gene Location: 7641-8519 bp Feature: gene Location: 8806-9546 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8974-9523 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8974-952 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4756 (pfam15948), RVT-Retrons

Seq: QTZZ01000099.1 Klebsiella variicola strain BD_DM_405b NODE_99_length_1788_cov_36.4798_pilon, whole genome shotgun sequence (1788 bp)
Overview 1 RT 1: 2-1785 bp Neighborhood of RT #1 [2, 1785] RVT-GII Feature: gene Location: 2-145 bp Feature: gene Location: 182-1399 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 437-968 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43 7-968 bp Feature: gene Location: 1546-1785 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII