myRT

myRT report for GCA_003387475.1_ASM338747v1

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Seq: QUNO01000006.1 Kutzneria buriramensis strain DSM 45791 Ga0104555_106, whole genome shotgun sequence (604892 bp)
Overview 1 RT 1: 552282-554427 bp 2 RT 2: 557198-558730 bp Neighborhood of RT #1 [552282, 554427] Cas2_I_II_III Cas_Cas1 RVT-CRISPR Neighborhood of RT #2 [557198, 558730] RVT-CRISPR CRISPR_Cas6 Feature: gene Location: 552282-552566 bp Feature: domain Description: Cas2_I_II_III Location: 552297-552525 bp Feature: domain Description: Cas2_I_II_III Location: 552297-552525 bp Feature: gene Location: 552557-553678 bp Feature: domain Description: Cas_Cas1 Location: 552704-553538 bp Feature: domain Description: Cas_Cas1 Location: 552704-553538 bp Feature: gene Location: 553675-554244 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 553699-554038 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 553699-554038 bp Feature: gene Location: 554296-554427 bp Feature: gene Location: 557198-557671 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 557408-557663 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 557408-557663 bp Feature: gene Location: 557664-558473 bp Feature: domain Description: CRISPR_Cas6 Location: 558051-558426 bp Feature: domain Description: CRISPR_Cas6 Location: 558051 -558426 bp Feature: gene Location: 558584-558730 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), Cas_Cas1 (pfam01867), RVT-CRISPR, CRISPR_Cas6 (pfam10040)

Seq: QUNO01000039.1 Kutzneria buriramensis strain DSM 45791 Ga0104555_139, whole genome shotgun sequence (45682 bp)
Overview 1 RT 1: 42936-45441 bp Neighborhood of RT #1 [42936, 45509] DUF4096 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 42936-43166 bp Feature: domain Description: DUF4096 Location: 42969-43158 bp Feature: domain Description: DUF4096 Location: 42 969-43158 bp Feature: gene Location: 43406-43588 bp Feature: gene Location: 43689-45509 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43956-44751 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43956-44751 bp Feature: domain Description: Intron_maturas2 Location: 44865-45084 bp Feature: domain Description: Intron_maturas2 Location: 44865-45084 bp Feature: domain Description: HNHc Note: nucleases Location: 45279-45441 bp Feature: domain Description: HNHc Note: nucleases Location: 452 79-45441 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4096 (pfam13340), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: QUNO01000042.1 Kutzneria buriramensis strain DSM 45791 Ga0104555_142, whole genome shotgun sequence (26842 bp)
Overview 1 RT 1: 20301-24986 bp Neighborhood of RT #1 [20301, 25672] KOG0029 RVT-GII GIIM DDE_5 DDE_5 Feature: gene Location: 20301-20753 bp Feature: domain Description: KOG0029 Location: 20370-20559 bp Feature: domain Description: KOG0029 Location: 203 70-20559 bp Feature: gene Location: 21236-21592 bp Feature: gene Location: 21643-22905 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21859-22528 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21859-22528 bp Feature: domain Description: GIIM Note: maturase Location: 22609-22828 bp Feature: domain Description: GIIM Note: maturase Location: 22609-22828 bp Feature: gene Location: 23096-24103 bp Feature: domain Description: DDE_5 Location: 23156-23948 bp Feature: domain Description: DDE_5 Location: 23 156-23 948 bp Feature: gene Location: 24128-25672 bp Feature: domain Description: DDE_5 Location: 24200-24986 bp Feature: domain Description: DDE_5 Location: 24200-24986 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG0029 (KOG0029, Amine oxidase ), RVT-GII, GIIM (pfam08388), DDE_5 (pfam13546)

Seq: QUNO01000044.1 Kutzneria buriramensis strain DSM 45791 Ga0104555_144, whole genome shotgun sequence (18239 bp)
Overview 1 RT 1: 1-2950 bp Neighborhood of RT #1 [1, 3075] RVT-GII GIIM DDE_Tnp_4 Feature: gene Location: 1-141 bp Feature: gene Location: 1011-1871 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1014-1440 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1014 -14 4 0 bp Feature: domain Description: GIIM Note: maturase Location: 1527-1734 bp Feature: domain Description: GIIM Note: maturase Location: 1527-1734 bp Feature: gene Location: 2414-2701 bp Feature: gene Location: 2182-3075 bp Feature: domain Description: DDE_Tnp_4 Location: 2746-2950 bp Feature: domain Description: DDE_Tnp_4 Location: 274 6-2950 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_4 (pfam13359)

Seq: QUNO01000046.1 Kutzneria buriramensis strain DSM 45791 Ga0104555_146, whole genome shotgun sequence (15433 bp)
Overview 1 RT 1: 10166-14946 bp Neighborhood of RT #1 [10166, 14946] RVT-GII Intron_maturas2 HNHc Transposase_20 Feature: gene Location: 10166-10453 bp Feature: gene Location: 10759-10956 bp Feature: gene Location: 11161-13068 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11404-12199 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11404-12199 bp Feature: domain Description: Intron_maturas2 Location: 12316-12538 bp Feature: domain Description: Intron_maturas2 Location: 12316-125 38 bp Feature: domain Description: HNHc Note: nucleases Location: 12724-12880 bp Feature: domain Description: HNHc Note: nucleases Location: 12724-12880 bp Feature: gene Location: 14020-14544 bp Feature: domain Description: Transposase_20 Location: 14131-14368 bp Feature: domain Description: Transposase_20 Location: 14131-14368 bp Feature: gene Location: 14665-14946 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Transposase_20 (pfam02371)

Seq: QUNO01000055.1 Kutzneria buriramensis strain DSM 45791 Ga0104555_155, whole genome shotgun sequence (3501 bp)
Overview 1 RT 1: 1-1857 bp Neighborhood of RT #1 [1, 1857] RVT-GII Feature: gene Location: 1-1002 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 217-877 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 217-877 bp Feature: gene Location: 965-1546 bp Feature: gene Location: 1627-1857 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: QUNO01000056.1 Kutzneria buriramensis strain DSM 45791 Ga0104555_156, whole genome shotgun sequence (2007 bp)
Overview 1 RT 1: 136-1771 bp Neighborhood of RT #1 [136, 1863] RVT-GII GIIM Feature: gene Location: 136-345 bp Feature: gene Location: 601-1863 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 817-1477 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 817 -147 7 bp Feature: domain Description: GIIM Note: maturase Location: 1561-1771 bp Feature: domain Description: GIIM Note: maturase Location: 1561-17 7 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)