myRT

myRT report for GCA_003388375.1_ASM338837v1

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Seq: QLJZ01000057.1 Escherichia coli strain LMR3158 NODE_57_length_12244_cov_31.613, whole genome shotgun sequence (12244 bp)
Overview 1 RT 1: 6744-11179 bp Neighborhood of RT #1 [6744, 11184] RVT-GII Intron_maturas2 HNHc PRK13732 DUF905 Feature: gene Location: 6744-6935 bp Feature: gene Location: 7126-7794 bp Feature: gene Location: 8357-10258 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8624-9455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8624-9455 bp Feature: domain Description: Intron_maturas2 Location: 9569-9827 bp Feature: domain Description: Intron_maturas2 Location: 9569-9827 bp Feature: domain Description: HNHc Note: nucleases Location: 10001-10163 bp Feature: domain Description: HNHc Note: nucleases Location: 1 0001 -1 01 63 bp Feature: gene Location: 10453-10893 bp Feature: domain Description: PRK13732 Location: 10459-10891 bp Feature: domain Description: PRK1 3732 Location: 1 0459-1 0891 bp Feature: gene Location: 10951-11184 bp Feature: domain Description: DUF905 Location: 10981-11179 bp Feature: domain Description: DUF905 Location: 1 0981 -1 1 1 79 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13732 (single-stranded DNA-binding protein; Provisional), DUF905 (pfam06006), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: QLJZ01000067.1 Escherichia coli strain LMR3158 NODE_67_length_6078_cov_23.1422, whole genome shotgun sequence (6078 bp)
Overview 1 RT 1: 3-6077 bp Neighborhood of RT #1 [3, 6076] RhsA RVT-GII group_II_RT_mat YhhI YhhI YhhI Feature: gene Location: 3-2576 bp Feature: domain Description: RhsA Location: 6-2142 bp Feature: domain Description: RhsA Location: 6-2 142 bp Feature: gene Location: 2941-3168 bp Feature: gene Location: 3419-4498 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3890-4481 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3890-4481 bp Feature: gene Location: 4520-4771 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 4526-4754 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 452 6-4754 bp Feature: gene Location: 5135-6076 bp Feature: domain Description: YhhI Location: 5141-5486 bp Feature: domain Description: YhhI Location: 5141-5486 bp Feature: domain Description: YhhI Location: 5543-5897 bp Feature: domain Description: YhhI Location: 5543-5897 bp Feature: domain Description: YhhI Location: 5915-6077 bp Feature: domain Description: YhhI Location: 5915-6077 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RhsA (COG3209), RVT-GII, group_II_RT_mat (TIGR04416), YhhI (COG5433)