myRT

myRT report for GCA_003388735.1_ASM338873v1

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Seq: QUBQ01000001.1 Paenibacillus paeoniae strain M4BSY-1 Scaffold1, whole genome shotgun sequence (2695621 bp)
Overview 1 RT 1: 950180-951884 bp 2 RT 2: 1581624-1587262 bp Neighborhood of RT #1 [950180, 951884] RVT-GII Neighborhood of RT #2 [1581624, 1588503] PHA02517 RVT-GII InsE Endotoxin_N Feature: gene Location: 950180-950320 bp Feature: gene Location: 950332-950640 bp Feature: gene Location: 950828-951091 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 950837-951089 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 950837-951 089 bp Feature: gene Location: 951113-951256 bp Feature: gene Location: 951663-951884 bp Feature: gene Location: 1581624-1582175 bp Feature: domain Description: PHA02517 Location: 1581672-1582173 bp Feature: domain Description: PHA0251 7 Location: 1 581 672-1 5821 73 bp Feature: gene Location: 1582785-1583759 bp Feature: gene Location: 1584841-1585359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1584976-1585162 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 584976-1 5851 62 bp Feature: gene Location: 1585509-1585805 bp Feature: domain Description: InsE Location: 1585518-1585794 bp Feature: domain Description: InsE Location: 1 58551 8-1 585794 bp Feature: gene Location: 1586305-1588503 bp Feature: domain Description: Endotoxin_N Location: 1586662-1587262 bp Feature: domain Description: Endotoxin_N Location: 1 586662-1 587262 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), Endotoxin_N (pfam03945)

Seq: QUBQ01000005.1 Paenibacillus paeoniae strain M4BSY-1 Scaffold5, whole genome shotgun sequence (352884 bp)
Overview 1 RT 1: 259521-264016 bp Neighborhood of RT #1 [259521, 264201] RVT-GII GIIM Tn7_Tnp_TnsA_N HTH_23 rve Mu-transpos_C Feature: gene Location: 259521-259688 bp Feature: gene Location: 259836-259967 bp Feature: gene Location: 260049-261341 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 260349-260982 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 60349-2 60982 bp Feature: domain Description: GIIM Note: maturase Location: 261111-261279 bp Feature: domain Description: GIIM Note: maturase Location: 2 61111-2 612 79 bp Feature: gene Location: 261521-261913 bp Feature: domain Description: Tn7_Tnp_TnsA_N Location: 261743-261899 bp Feature: domain Description: Tn7_Tnp_TnsA_N Location: 2 61743-2 61899 bp Feature: gene Location: 262273-264201 bp Feature: domain Description: HTH_23 Location: 262696-262795 bp Feature: domain Description: HTH_2 3 Location: 2 62 696-2 62 795 bp Feature: domain Description: rve Location: 263164-263575 bp Feature: domain Description: rve Location: 2 63164-2 63575 bp Feature: domain Description: Mu-transpos_C Location: 263866-264016 bp Feature: domain Description: Mu-transpos_C Location: 2 63866-2 64016 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Tn7_Tnp_TnsA_N (pfam08722), HTH_23 (pfam13384), rve (pfam00665), Mu-transpos_C (pfam09299)