myRT

myRT report for GCA_003388915.1_ASM338891v1

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Seq: QLKB01000161.1 Escherichia coli strain CB555 NODE_162_length_2570_cov_57.750307, whole genome shotgun sequence (2570 bp)
Overview 1 RT 1: 16-2570 bp Neighborhood of RT #1 [16, 2569] RVT-GII GIIM PHA02517 Feature: gene Location: 16-387 bp Feature: gene Location: 681-2204 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 954-1686 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 954-1 686 bp Feature: domain Description: GIIM Note: maturase Location: 1761-1959 bp Feature: domain Description: GIIM Note: maturase Location: 1 761 -1 959 bp Feature: gene Location: 2381-2569 bp Feature: domain Description: PHA02517 Location: 2384-2570 bp Feature: domain Description: PHA0251 7 Location: 2384-2570 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: QLKB01000033.1 Escherichia coli strain CB555 NODE_33_length_45919_cov_8.774175, whole genome shotgun sequence (45919 bp)
Overview 1 RT 1: 925-4395 bp Neighborhood of RT #1 [925, 4502] Arm-DNA-bind_3 RVT-Retrons PRK09678 Feature: gene Location: 925-1227 bp Feature: domain Description: Arm-DNA-bind_3 Location: 934-1186 bp Feature: domain Description: Arm-DNA-bind_3 Location: 934-1186 bp Feature: gene Location: 1411-1656 bp Feature: gene Location: 1682-2614 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1784-2378 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1784-2 378 bp Feature: gene Location: 2616-3602 bp Feature: gene Location: 4230-4502 bp Feature: domain Description: PRK09678 Location: 4239-4395 bp Feature: domain Description: PRK09678 Location: 42 39-4395 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, PRK09678 (DNA-binding transcriptional regulator; Provisional), Arm-DNA-bind_3 (pfam13356)