myRT

myRT report for GCA_003389435.1_ASM338943v1

Download annotations/find similar RTs

Seq: QQWB01000019.1 Microcystis flos-aquae DF17 NODE_164_length_78583_cov_211.89, whole genome shotgun sequence (78583 bp)
Overview 1 RT 1: 62748-65655 bp Neighborhood of RT #1 [62748, 65655] RVT-UG14 Feature: gene Location: 62748-63005 bp Feature: gene Location: 63011-63199 bp Feature: gene Location: 63333-64838 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 63747-64227 bp Feature: RT Description: RVT-UG1 4 Note: UG1 4 RT Location: 63747-64227 bp Feature: gene Location: 65147-65305 bp Feature: gene Location: 65446-65655 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG14

Seq: QQWB01000025.1 Microcystis flos-aquae DF17 NODE_186_length_67415_cov_204.513, whole genome shotgun sequence (67415 bp)
Overview 1 RT 1: 21617-26911 bp Neighborhood of RT #1 [21617, 26911] COG5421 DUF433 RVT_N RVT-GII GIIM McrA Feature: gene Location: 21617-23353 bp Feature: domain Description: COG5421 Location: 22121-23066 bp Feature: domain Description: COG542 1 Location: 2 2 12 1-2 3066 bp Feature: gene Location: 23672-24049 bp Feature: domain Description: DUF433 Location: 23729-23852 bp Feature: domain Description: DUF433 Location: 2 372 9-2 3852 bp Feature: gene Location: 24408-25817 bp Feature: domain Description: RVT_N Location: 24414-24582 bp Feature: domain Description: RVT_N Location: 2 4414-2 4582 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24639-25233 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 4639-2 52 33 bp Feature: domain Description: GIIM Note: maturase Location: 25290-25482 bp Feature: domain Description: GIIM Note: maturase Location: 2 52 90-2 5482 bp Feature: domain Description: McrA Location: 25503-25788 bp Feature: domain Description: McrA Location: 2 5503-2 5788 bp Feature: gene Location: 25912-26091 bp Feature: gene Location: 26756-26911 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5421 (Transposase ), DUF433 (pfam04255), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: QQWB01000006.1 Microcystis flos-aquae DF17 NODE_91_length_152052_cov_197.105, whole genome shotgun sequence (152052 bp)
Overview 1 RT 1: 76306-82275 bp Neighborhood of RT #1 [76306, 82283] NrdF ppnK RVT_N RVT-GII GIIM McrA CpcS Feature: gene Location: 76306-77373 bp Feature: domain Description: NrdF Location: 76357-77362 bp Feature: domain Description: NrdF Location: 763 57-773 62 bp Feature: gene Location: 77613-78533 bp Feature: domain Description: ppnK Location: 77616-78528 bp Feature: domain Description: ppnK Location: 77616-78528 bp Feature: gene Location: 78694-80478 bp Feature: domain Description: RVT_N Location: 78760-79003 bp Feature: domain Description: RVT_N Location: 78760-79003 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79048-79717 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79048-79717 bp Feature: domain Description: GIIM Note: maturase Location: 79822-80035 bp Feature: domain Description: GIIM Note: maturase Location: 79822-8003 5 bp Feature: domain Description: McrA Location: 80116-80431 bp Feature: domain Description: McrA Location: 80116-8043 1 bp Feature: gene Location: 80843-81001 bp Feature: gene Location: 81744-82283 bp Feature: domain Description: CpcS Location: 81795-82275 bp Feature: domain Description: CpcS Location: 81795-82275 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NrdF (COG0208), ppnK (PRK04885), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), CpcS (cd16339)