myRT

myRT report for GCA_003389455.1_ASM338945v1

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Seq: QUAC01000483.1 Streptomyces sp. NEAU-D10 C3431, whole genome shotgun sequence (63329 bp)
Overview 1 RT 1: 15721-19907 bp Neighborhood of RT #1 [15721, 20275] PRK02186 RVT-GII GIIM ParB HTH_23 HTH_23 Feature: gene Location: 15721-17004 bp Feature: domain Description: PRK02186 Location: 15754-16879 bp Feature: domain Description: PRK021 86 Location: 1 5754-1 6879 bp Feature: gene Location: 17420-17701 bp Feature: gene Location: 17932-18723 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18088-18493 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 8088-1 8493 bp Feature: domain Description: GIIM Note: maturase Location: 18568-18715 bp Feature: domain Description: GIIM Note: maturase Location: 1 8568-1 871 5 bp Feature: gene Location: 18864-19178 bp Feature: gene Location: 19253-20275 bp Feature: domain Description: ParB Location: 19319-19565 bp Feature: domain Description: ParB Location: 1 931 9-1 9565 bp Feature: domain Description: HTH_23 Location: 19622-19712 bp Feature: domain Description: HTH_23 Location: 1 9622-1 971 2 bp Feature: domain Description: HTH_23 Location: 19811-19907 bp Feature: domain Description: HTH_23 Location: 1 981 1 -1 9907 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK02186 (argininosuccinate lyase; Provisional), RVT-GII, GIIM (pfam08388), ParB (smart00470), HTH_23 (pfam13384)

Seq: QUAC01000156.1 Streptomyces sp. NEAU-D10 scaffold159, whole genome shotgun sequence (9474 bp)
Overview 1 RT 1: 5168-9180 bp Neighborhood of RT #1 [5168, 9180] BLMA_like HTH_32 RVT-GII GIIM DDE_3 Feature: gene Location: 5168-5431 bp Feature: domain Description: BLMA_like Location: 5237-5399 bp Feature: domain Description: BLMA_like Location: 52 37-5399 bp Feature: gene Location: 5581-6219 bp Feature: domain Description: HTH_32 Location: 5770-6001 bp Feature: domain Description: HTH_32 Location: 5770-6001 bp Feature: gene Location: 6630-8096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6972-7653 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6972 -7653 bp Feature: domain Description: GIIM Note: maturase Location: 7725-7956 bp Feature: domain Description: GIIM Note: maturase Location: 772 5-7956 bp Feature: gene Location: 8596-8922 bp Feature: domain Description: DDE_3 Location: 8602-8761 bp Feature: domain Description: DDE_3 Location: 8602 -8761 bp Feature: gene Location: 8968-9180 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BLMA_like (cd08349), HTH_32 (pfam13565), RVT-GII, GIIM (pfam08388), DDE_3 (pfam13358)

Seq: QUAC01000246.1 Streptomyces sp. NEAU-D10 scaffold248, whole genome shotgun sequence (47091 bp)
Overview 1 RT 1: 11286-16156 bp Neighborhood of RT #1 [11286, 16218] DDE_Tnp_Tn3 RVT-GII Ere-like DDE_Tnp_1 Feature: gene Location: 11286-11918 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 11454-11907 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 11454-11907 bp Feature: gene Location: 11983-12174 bp Feature: gene Location: 13068-13385 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13071-13374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 071-13 3 74 bp Feature: gene Location: 13780-14994 bp Feature: domain Description: Ere-like Location: 13915-14968 bp Feature: domain Description: Ere-like Location: 13 915-14968 bp Feature: gene Location: 15688-16218 bp Feature: domain Description: DDE_Tnp_1 Location: 15730-16156 bp Feature: domain Description: DDE_Tnp_1 Location: 1573 0-16156 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_Tn3 (pfam01526), RVT-GII, Ere-like (cd14728), DDE_Tnp_1 (pfam01609)