myRT

myRT report for GCA_003390325.1_ASM339032v1

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Seq: QUOK01000001.1 Rhodohalobacter sp. SW132, whole genome shotgun sequence (1110707 bp)
Overview 1 RT 1: 967483-975075 bp Neighborhood of RT #1 [967483, 975497] RVT-UG5 UvrD UvrD UvrD YbjD Feature: gene Location: 967483-967686 bp Feature: gene Location: 967705-968292 bp Feature: gene Location: 968441-971521 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 968900-969383 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 968900-969383 bp Feature: gene Location: 971735-973471 bp Feature: domain Description: UvrD Location: 971828-972041 bp Feature: domain Description: UvrD Location: 971 828-972041 bp Feature: domain Description: UvrD Location: 972170-972494 bp Feature: domain Description: UvrD Location: 9721 70-972494 bp Feature: domain Description: UvrD Location: 973157-973397 bp Feature: domain Description: UvrD Location: 9731 57-973397 bp Feature: gene Location: 973464-975497 bp Feature: domain Description: YbjD Location: 973467-975075 bp Feature: domain Description: YbjD Location: 973467-975075 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5, UvrD (COG0210), YbjD (COG3593)

Seq: QUOK01000003.1 Rhodohalobacter sp. SW132, whole genome shotgun sequence (534273 bp)
Overview 1 RT 1: 518471-525592 bp Neighborhood of RT #1 [518471, 525606] AAA_15 TOPRIM_OLD RVT-UG2 MPP_Mre11_N SbcC SbcC Feature: gene Location: 518471-520249 bp Feature: domain Description: AAA_15 Location: 518480-519482 bp Feature: domain Description: AAA_15 Location: 518480-519482 bp Feature: domain Description: TOPRIM_OLD Location: 519641-519869 bp Feature: domain Description: TOPRIM_OLD Location: 519641-519869 bp Feature: gene Location: 520426-520677 bp Feature: gene Location: 520680-522050 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 520929-521727 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 52 092 9-52 172 7 bp Feature: gene Location: 522050-523168 bp Feature: domain Description: MPP_Mre11_N Location: 522074-522734 bp Feature: domain Description: MPP_Mre11_N Location: 52 2 074-52 2 734 bp Feature: gene Location: 523165-525606 bp Feature: domain Description: SbcC Location: 523168-524380 bp Feature: domain Description: SbcC Location: 52 3168-52 4380 bp Feature: domain Description: SbcC Location: 524527-525592 bp Feature: domain Description: SbcC Location: 52 452 7-52 5592 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), TOPRIM_OLD (cd01026), RVT-UG2, MPP_Mre11_N (cd00840), SbcC (COG0419)

Seq: QUOK01000007.1 Rhodohalobacter sp. SW132, whole genome shotgun sequence (264382 bp)
Overview 1 RT 1: 249367-257059 bp Neighborhood of RT #1 [249367, 257103] COG0610 DUF45 RVT-G2Lc Baculo_PEP_C Baculo_PEP_C Baculo_PEP_C Feature: gene Location: 249367-252408 bp Feature: domain Description: COG0610 Location: 249391-252349 bp Feature: domain Description: COG0610 Location: 2493 91-2523 49 bp Feature: gene Location: 252398-253105 bp Feature: domain Description: DUF45 Location: 252476-253094 bp Feature: domain Description: DUF45 Location: 252476-253 094 bp Feature: gene Location: 253275-254720 bp Feature: RT Description: RVT-G2Lc Note: G2Lc RT Location: 253680-254331 bp Feature: RT Description: RVT-G2Lc Note: G2Lc RT Location: 253 680-2543 3 1 bp Feature: gene Location: 254968-255126 bp Feature: gene Location: 255715-257103 bp Feature: domain Description: Baculo_PEP_C Location: 256081-256300 bp Feature: domain Description: Baculo_PEP_C Location: 256081-2563 00 bp Feature: domain Description: Baculo_PEP_C Location: 256417-256678 bp Feature: domain Description: Baculo_PEP_C Location: 256417-256678 bp Feature: domain Description: Baculo_PEP_C Location: 256858-257059 bp Feature: domain Description: Baculo_PEP_C Location: 256858-257059 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), DUF45 (pfam01863), RVT-G2Lc, Baculo_PEP_C (pfam04513)