myRT

myRT report for GCA_003399505.1_ASM339950v1

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Seq: QUQQ01000001.1 Bacillus sp. OE NODE_1_length_1310418_cov_60.043850, whole genome shotgun sequence (1310418 bp)
Overview 1 RT 1: 755024-762152 bp Neighborhood of RT #1 [755024, 762166] RimP polC RVT-GII HNHc polC Feature: gene Location: 755024-755494 bp Feature: domain Description: RimP Location: 755030-755492 bp Feature: domain Description: RimP Location: 755030-755492 bp Feature: gene Location: 755828-757267 bp Feature: domain Description: polC Location: 755861-757265 bp Feature: domain Description: polC Location: 755861 -757265 bp Feature: gene Location: 757341-758537 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 757647-757932 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 757647-757932 bp Feature: domain Description: HNHc Note: nucleases Location: 758268-758418 bp Feature: domain Description: HNHc Note: nucleases Location: 758268-75841 8 bp Feature: gene Location: 758702-758965 bp Feature: gene Location: 759254-762166 bp Feature: domain Description: polC Location: 759272-762152 bp Feature: domain Description: polC Location: 759272-7621 52 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RimP (COG0779), polC (TIGR00354), RVT-GII, HNHc (smart00507)

Seq: QUQQ01000004.1 Bacillus sp. OE NODE_4_length_424457_cov_46.516412, whole genome shotgun sequence (424457 bp)
Overview 1 RT 1: 242353-252500 bp Neighborhood of RT #1 [242353, 252679] RVT-GII HNHc RVT-GII Intron_maturas2 HNHc TraG-D_C Ftsk_gamma Ftsk_gamma rpsA Feature: gene Location: 242353-242823 bp Feature: gene Location: 242841-244145 bp Feature: gene Location: 244779-246617 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 245124-245820 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 4512 4-2 4582 0 bp Feature: domain Description: HNHc Note: nucleases Location: 246372-246504 bp Feature: domain Description: HNHc Note: nucleases Location: 2 46372 -2 46504 bp Feature: gene Location: 246683-246952 bp Feature: gene Location: 247538-249355 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 247808-248633 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 47808-2 48633 bp Feature: domain Description: Intron_maturas2 Location: 248714-249005 bp Feature: domain Description: Intron_maturas2 Location: 2 48714-2 49005 bp Feature: domain Description: HNHc Note: nucleases Location: 249152-249329 bp Feature: domain Description: HNHc Note: nucleases Location: 2 49152 -2 4932 9 bp Feature: gene Location: 249549-251504 bp Feature: domain Description: TraG-D_C Location: 249600-249960 bp Feature: domain Description: TraG-D_C Location: 2 49600-2 49960 bp Feature: domain Description: Ftsk_gamma Location: 250368-250548 bp Feature: domain Description: Ftsk_gamma Location: 2 50368-2 50548 bp Feature: domain Description: Ftsk_gamma Location: 250701-250836 bp Feature: domain Description: Ftsk_gamma Location: 2 50701-2 50836 bp Feature: gene Location: 251693-252679 bp Feature: domain Description: rpsA Location: 251963-252500 bp Feature: domain Description: rpsA Location: 2 51963-2 52 500 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), Intron_maturas2 (pfam01348), TraG-D_C (pfam12696), Ftsk_gamma (smart00843), rpsA (TIGR00717)