myRT

myRT report for GCA_003400555.1_ASM340055v1

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Seq: PXJW01000134.1 Escherichia coli strain CRE75 NODE_134_length_2271_cov_340.839, whole genome shotgun sequence (2271 bp)
Overview 1 RT 1: 1-1935 bp Neighborhood of RT #1 [1, 2180] RVT-GII GIIM Feature: gene Location: 1-363 bp Feature: gene Location: 657-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1 662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 1 737-1 935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PXJW01000056.1 Escherichia coli strain CRE75 NODE_56_length_28256_cov_68.9841, whole genome shotgun sequence (28256 bp)
Overview 1 RT 1: 18354-22637 bp Neighborhood of RT #1 [18354, 22645] RVT-GII RVT-GII GIIM YesM Feature: gene Location: 18354-19259 bp Feature: gene Location: 19397-19588 bp Feature: gene Location: 19745-20284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20075-20153 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 0075-2 0153 bp Feature: gene Location: 20312-20833 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20318-20600 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 0318-2 0600 bp Feature: domain Description: GIIM Note: maturase Location: 20648-20828 bp Feature: domain Description: GIIM Note: maturase Location: 2 0648-2 082 8 bp Feature: gene Location: 21155-21343 bp Feature: gene Location: 21383-22645 bp Feature: domain Description: YesM Location: 21896-22637 bp Feature: domain Description: YesM Location: 2 1896-2 2 637 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YesM (COG2972)

Seq: PXJW01000008.1 Escherichia coli strain CRE75 NODE_8_length_111772_cov_60.1084, whole genome shotgun sequence (111772 bp)
Overview 1 RT 1: 22412-28655 bp Neighborhood of RT #1 [22412, 28792] Phage_integrase RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 22412-22678 bp Feature: domain Description: Phage_integrase Location: 22478-22574 bp Feature: domain Description: Phage_integrase Location: 22478-22574 bp Feature: gene Location: 22761-23231 bp Feature: gene Location: 23578-26787 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 24106-24595 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 24106-24595 bp Feature: domain Description: nitrilase Location: 26101-26698 bp Feature: domain Description: nitrilase Location: 26101-26698 bp Feature: gene Location: 27082-27885 bp Feature: domain Description: AbiEi_3_N Location: 27115-27376 bp Feature: domain Description: AbiEi_3 _N Location: 27115-273 76 bp Feature: domain Description: AbiEi_3 Location: 27388-27844 bp Feature: domain Description: AbiEi_3 Location: 273 88-27844 bp Feature: gene Location: 27872-28792 bp Feature: domain Description: AbiEii Location: 27914-28655 bp Feature: domain Description: AbiEii Location: 27914-28655 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_integrase (pfam00589), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)