myRT

myRT report for GCA_003401505.1_ASM340150v1

Download annotations/find similar RTs

Seq: PXLP01000106.1 Klebsiella pneumoniae strain CRE07 NODE_106_length_670_cov_1.75447, whole genome shotgun sequence (670 bp)
Overview 1 RT 1: 2-668 bp Neighborhood of RT #1 [2, 667] RVT-GII Feature: gene Location: 2-667 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 239-668 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 239-668 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PXLP01000026.1 Klebsiella pneumoniae strain CRE07 NODE_26_length_86403_cov_62.8658, whole genome shotgun sequence (86403 bp)
Overview 1 RT 1: 685-7535 bp Neighborhood of RT #1 [685, 7555] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 685-1350 bp Feature: domain Description: INT_P4_C Location: 790-1348 bp Feature: domain Description: INT_P4_C Location: 790-1348 bp Feature: gene Location: 1611-2051 bp Feature: domain Description: Integrase_1 Location: 1617-1833 bp Feature: domain Description: Integrase_1 Location: 1617-1833 bp Feature: gene Location: 2108-4186 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2516-2960 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2 516-2 960 bp Feature: gene Location: 4186-6795 bp Feature: domain Description: FimD Location: 4243-6784 bp Feature: domain Description: FimD Location: 42 43-6784 bp Feature: gene Location: 6827-7555 bp Feature: domain Description: FimC Location: 6875-7535 bp Feature: domain Description: FimC Location: 6875-7535 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)